RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 KBTBD6Q86V97 674 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 RASSF3Q86WH2 238 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 MMAAQ8IVH4 418 aaKnown RBP8.07□□□□□ -1.12
CCDC40-215ENST00000576033 CCDC117Q8IWD4 279 aaPredicted RBP8.07□□□□□ -1.12
CCDC40-215ENST00000576033 PGBD3Q8N328 593 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 ATP11CQ8NB49 1132 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 FAM71BQ8TC56 605 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 TEKT4Q8WW24 435 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 ALG3Q92685 438 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 EXOC4Q96A65 974 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 CALR3Q96L12 384 aaKnown RBP8.07□□□□□ -1.12
CCDC40-215ENST00000576033 FAM129BQ96TA1 746 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 FAM118BQ9BPY3 351 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 SMOC1Q9H4F8 434 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 SAE1Q9UBE0 346 aaPredicted RBP8.07□□□□□ -1.12
CCDC40-215ENST00000576033 FBXO4Q9UKT5 387 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 SAR1BQ9Y6B6 198 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 SDK1Q7Z5N4 2213 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 LRRK1Q38SD2 2015 aa8.07□□□□□ -1.12
CCDC40-215ENST00000576033 OTOGLQ3ZCN5 2332 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 ADAMTS9Q9P2N4 1935 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 IGHV1OR15-9A0A0B4J2B8 117 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 PDE2AO00408 941 aaPredicted RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 ENC1O14682 589 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 AXIN1O15169 862 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 FGF10O15520 208 aaPredicted RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 DDX3YO15523 660 aaKnown RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 PIGNO95427 931 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 PEX11BO96011 259 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 ATP5BP06576 529 aaKnown RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 H2AFXP16104 143 aaPredicted RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 DESP17661 470 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 TCP1P17987 556 aaKnown RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 NRLP54845 237 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 SERINC3Q13530 473 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 CAMK2GQ13555 558 aaPredicted RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 ACAP1Q15027 740 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 CYTH1Q15438 398 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 ELF2Q15723 593 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 IFI16Q16666 785 aaKnown RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 HNRNPA1L2Q32P51 320 aaKnown RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 MAP7D1Q3KQU3 841 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 MEI1Q5TIA1 1274 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 KAZNQ674X7 775 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 PRR23BQ6ZRT6 265 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 ASCL5Q7RTU5 278 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 TRMT11Q7Z4G4 463 aaKnown RBP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 WDR5BQ86VZ2 330 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 LONP2Q86WA8 852 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 TMPRSS6Q8IU80 811 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 CREG2Q8IUH2 290 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 UMODL1-AS1Q8N2C9 162 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.06□□□□□ -1.12
CCDC40-215ENST00000576033 AADATQ8N5Z0 425 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 PLD5Q8N7P1 536 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 KCTD6Q8NC69 237 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 ZBTB44Q8NCP5 570 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 OR2A12Q8NGT7 310 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 UCMAQ8WVF2 138 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 UBE2Q2Q8WVN8 375 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 FAF2Q96CS3 445 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 CEP41Q9BYV8 373 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 CATSPERBQ9H7T0 1116 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 CAAP1Q9H8G2 361 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 C10orf88Q9H8K7 445 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 LHX3Q9UBR4 397 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 SLC25A13Q9UJS0 675 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 PLA2G4CQ9UP65 541 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 HS3ST2Q9Y278 367 aa8.06□□□□□ -1.12
CCDC40-215ENST00000576033 MYLKQ15746 1914 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 A0A1W2PP55 124 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 TCRBV7S2A1N4TA0A589 114 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 F5H423 210 aaPredicted RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 KDELR3O43731 214 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ATP9BO43861 1147 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 SYNCRIPO60506 623 aaKnown RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 LILRB5O75023 590 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ATG13O75143 517 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 RPP40O75818 363 aaKnown RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ASLP04424 464 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 PRKCGP05129 697 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 SRPRAP08240 638 aaKnown RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 CTNNA1P35221 906 aaKnown RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ARL4AP40617 200 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 CDKN2BP42772 138 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 MAXP61244 160 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ST8SIA6P61647 398 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 SEMG2Q02383 582 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 CKAP4Q07065 602 aaKnown RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 MTA1Q13330 715 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 SLC12A1Q13621 1099 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 IHHQ14623 411 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 STARD3Q14849 445 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 PTPRRQ15256 657 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 HADHQ16836 314 aaKnown RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 ERCC6LQ2NKX8 1250 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 PREPLQ4J6C6 727 aaPredicted RBP8.05□□□□□ -1.12
CCDC40-215ENST00000576033 BOLA3Q53S33 107 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 TMCO3Q6UWJ1 677 aa8.05□□□□□ -1.12
CCDC40-215ENST00000576033 KDM7AQ6ZMT4 941 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms