RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 EIF3CLB5ME19 914 aaKnown RBP8.85□□□□□ -0.99
SMG6-216ENST00000575176 RASA4BC9J798 803 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 MUSKO15146 869 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 FGF10O15520 208 aaPredicted RBP8.85□□□□□ -0.99
SMG6-216ENST00000575176 RASA4O43374 803 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 PLRG1O43660 514 aaKnown RBP8.85□□□□□ -0.99
SMG6-216ENST00000575176 RAMP2O60895 175 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 SEMA4FO95754 770 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 WNT1P04628 370 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 TMEM253P0C7T8 217 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 ERCC2P18074 760 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 C5AR1P21730 350 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 MAOBP27338 520 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 EPHB2P29323 1055 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 SLC8A1P32418 973 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 RGRP47804 291 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 ST8SIA6P61647 398 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 CNTN1Q12860 1018 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 IHHQ14623 411 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 ACAP1Q15027 740 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 E2F5Q15329 346 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 ARL13BQ3SXY8 428 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 TRIM61Q5EBN2 209 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 CCDC122Q5T0U0 273 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 ERMARDQ5T6L9 678 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 DCAF12L1Q5VU92 463 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 RWDD4Q6NW29 188 aaKnown RBP8.85□□□□□ -0.99
SMG6-216ENST00000575176 SCYL2Q6P3W7 929 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 LAYNQ6UX15 382 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 POLNQ7Z5Q5 900 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 FAM124AQ86V42 546 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 GPR161Q8N6U8 529 aaKnown RBP8.85□□□□□ -0.99
SMG6-216ENST00000575176 OR2I1PQ8NGU4 316 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 PIP4K2CQ8TBX8 421 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 NETO1Q8TDF5 533 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 TEKT4Q8WW24 435 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 PIGKQ92643 395 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 ISG20Q96AZ6 181 aaKnown RBP8.85□□□□□ -0.99
SMG6-216ENST00000575176 FAF2Q96CS3 445 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 CSPG4P5Q96PW8 444 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 EIF3CQ99613 913 aaKnown RBP8.85□□□□□ -0.99
SMG6-216ENST00000575176 HINFPQ9BQA5 517 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 EDEM2Q9BV94 578 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 NEUROG2Q9H2A3 272 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 TNKS2Q9H2K2 1166 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 DHX35Q9H5Z1 703 aaKnown RBP8.85□□□□□ -0.99
SMG6-216ENST00000575176 NHEJ1Q9H9Q4 299 aaPredicted RBP8.85□□□□□ -0.99
SMG6-216ENST00000575176 PCDH18Q9HCL0 1135 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 SALL4Q9UJQ4 1053 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 SLC25A13Q9UJS0 675 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 SCML1Q9UN30 329 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 TFR2Q9UP52 801 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 DMXL2Q8TDJ6 3036 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 EPG5Q9HCE0 2579 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 PLXNB3Q9ULL4 1909 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 A0A1W2PR77 199 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 J3KR12 359 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 CBX4O00257 560 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 EEF2KO00418 725 aaKnown RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 KDELR3O43731 214 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 CREB3O43889 395 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 PRAMEF11O60813 436 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 TMCC1O94876 653 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 PROSCO94903 275 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 ADH1BP00325 375 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 GSRP00390 522 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 SERPINF2P08697 491 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 ENGP17813 658 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 OXTRP30559 389 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 GKP32189 559 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 MAN1A1P33908 653 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 ABL2P42684 1182 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 MAP1BP46821 2468 aaKnown RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 HCAR3P49019 387 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 CCNHP51946 323 aaPredicted RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 YBEYP58557 167 aaPredicted RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 TPI1P60174 286 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 GRIK2Q13002 908 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 BYSLQ13895 437 aaKnown RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 DPYSL3Q14195 570 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 FGL2Q14314 439 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 CYTH1Q15438 398 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 PARP15Q460N3 678 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 ATP13A4Q4VNC1 1196 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 TMEM259Q4ZIN3 620 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 STPG1Q5TH74 334 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 NCEH1Q6PIU2 408 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 LEKR1Q6ZMV7 388 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 PARS2Q7L3T8 475 aaKnown RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 ZSWIM9Q86XI8 627 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 CNGA4Q8IV77 575 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 PLPP6Q8IY26 295 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 ZCCHC9Q8N567 271 aaKnown RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 PCDH20Q8N6Y1 951 aaKnown RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 CELF6Q96J87 481 aaKnown RBP8.84□□□□□ -0.99
SMG6-216ENST00000575176 EPAS1Q99814 870 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMG6-216ENST00000575176 SLC39A8Q9C0K1 460 aa8.84□□□□□ -0.99
SMG6-216ENST00000575176 CAAP1Q9H8G2 361 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms