RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 CXCL14O95715 111 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 CNTFP26441 200 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 RFWD3Q6PCD5 774 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 CHST9Q7L1S5 443 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 CDKL2Q92772 493 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 IMP4Q96G21 291 aaKnown RBP28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 ZNF599Q96NL3 588 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 KLHL5Q96PQ7 755 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 AGO1Q9UL18 857 aaKnown RBP28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 SOX13Q9UN79 622 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 RPS6KL1Q9Y6S9 549 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 C5orf67F2Z3F1 127 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 PRAMEF11O60813 436 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 SPAG7O75391 227 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 CLDN11O75508 207 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 NEBLO76041 1014 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 MT-CYBP00156 380 aaPredicted RBP28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 RB1P06400 928 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 ADH1AP07327 375 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 DRD4P21917 467 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 GBP2P32456 591 aaPredicted RBP28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 WDR4P57081 412 aaKnown RBP28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 MGAT5Q09328 741 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 LRRC14Q15048 493 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 CCDC149Q6ZUS6 474 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 NSMCE1Q8WV22 266 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 DYDC1Q8WWB3 177 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 RABEP2Q9H5N1 569 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 VPS45Q9NRW7 570 aa28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 ZFP37Q9Y6Q3 630 aaPredicted RBP28.91■■■□□ 2.22
CTDNEP1-210ENST00000574322 ZWINTO95229 277 aa28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 SLC10A7Q0GE19 358 aa28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 CERCAMQ5T4B2 595 aa28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 DENND5AQ6IQ26 1287 aa28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 RANBP10Q6VN20 620 aa28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 MGARPQ8TDB4 240 aa28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 PRICKLE1Q96MT3 831 aaPredicted RBP28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 FCRL3Q96P31 734 aaPredicted RBP28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 KIFC1Q9BW19 673 aa28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 LRRC3Q9BY71 257 aa28.9■■■□□ 2.22
CTDNEP1-210ENST00000574322 ZCWPW2A0A1B0GU75 182 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 CA4P22748 312 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 ANKRD20A4Q4UJ75 823 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 KDELC1Q6UW63 502 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 TIFABQ6ZNK6 161 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 TMC7Q7Z402 723 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 TADA1Q96BN2 335 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 CERS2Q96G23 380 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 MAGEB18Q96M61 343 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 PDFQ9HBH1 243 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 ARNT2Q9HBZ2 717 aa28.89■■■□□ 2.22
CTDNEP1-210ENST00000574322 SOX1O00570 391 aaPredicted RBP28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 TM9SF1O15321 606 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 UGT1A9O60656 530 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 RPA3P35244 121 aaPredicted RBP28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 DNAJC3Q13217 504 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 FOXR1Q6PIV2 292 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 CFAP52Q8N1V2 620 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 SERBP1Q8NC51 408 aaKnown RBP eCLIP28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 SERAC1Q96JX3 654 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 MRGPRX2Q96LB1 330 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 APOL2Q9BQE5 337 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 UGT1A7Q9HAW7 530 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 UGT1A10Q9HAW8 530 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 UGT1A8Q9HAW9 530 aa28.89■■■□□ 2.21
CTDNEP1-210ENST00000574322 DENND4CQ5VZ89 1909 aa28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 TRIM49D1C9J1S8 452 aa28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 SPATA31D3P0C874 917 aa28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 MBL2P11226 248 aaPredicted RBP28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 ACVRL1P37023 503 aa28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 IL9RQ01113 521 aa28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 GNA12Q03113 381 aa28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 TMCO4Q5TGY1 634 aa28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 SPATA31D4Q6ZUB0 917 aa28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 UNC5BQ8IZJ1 945 aa28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 PTCD2Q8WV60 388 aaKnown RBP28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 ALG13Q9NP73 1137 aaKnown RBP28.88■■■□□ 2.21
CTDNEP1-210ENST00000574322 ILVBLA1L0T0 632 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 CCT5P48643 541 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 RPS24P62847 133 aaKnown RBP28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 PCID2Q5JVF3 399 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 POTEHQ6S545 545 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 SETD3Q86TU7 594 aaPredicted RBP28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 TMC8Q8IU68 726 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 IPMKQ8NFU5 416 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 WBP2Q969T9 261 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 PABPC5Q96DU9 382 aaKnown RBP28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 EMILIN2Q9BXX0 1053 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 ZNF576Q9H609 170 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 ATP13A1Q9HD20 1204 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 NT5MQ9NPB1 228 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 MKS1Q9NXB0 559 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 TBC1D30Q9Y2I9 924 aa28.87■■■□□ 2.21
CTDNEP1-210ENST00000574322 A0A1B0GVM2 712 aa28.86■■■□□ 2.21
CTDNEP1-210ENST00000574322 HMX2A2RU54 273 aa28.86■■■□□ 2.21
CTDNEP1-210ENST00000574322 TCAF2A6NFQ2 919 aa28.86■■■□□ 2.21
CTDNEP1-210ENST00000574322 GREM1O60565 184 aa28.86■■■□□ 2.21
CTDNEP1-210ENST00000574322 LRG1P02750 347 aa28.86■■■□□ 2.21
CTDNEP1-210ENST00000574322 HOXD9P28356 352 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms