RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FRYQ5TBA9 3013 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 CFAP47Q6ZTR5 3102 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 ZFHX4Q86UP3 3567 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 RALGAPA1Q6GYQ0 2036 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 ALOX15BO15296 676 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 HRO43593 1189 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 SIN3BO75182 1162 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 DNTTP04053 509 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 C7P10643 843 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 ZFXP17010 805 aaPredicted RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 GLDCP23378 1020 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 OXTRP30559 389 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 P2RY2P41231 377 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 RECQLP46063 649 aaPredicted RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 NUMBP49757 651 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 SERPINH1P50454 418 aaKnown RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 PAPOLAP51003 745 aaKnown RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 COPAP53621 1224 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 ARF5P84085 180 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 DPYSL3Q14195 570 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 ELAVL3Q14576 367 aaKnown RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 AASDHQ4L235 1098 aaPredicted RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 INO80DQ53TQ3 878 aaPredicted RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 ANKRD20A8PQ5CZ79 823 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 AFMIDQ63HM1 303 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 SLC36A4Q6YBV0 504 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 CPNE8Q86YQ8 564 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 LRRC49Q8IUZ0 686 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 PLPP6Q8IY26 295 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 PCDH20Q8N6Y1 951 aaKnown RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 ZNF366Q8N895 744 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 KIAA1524Q8TCG1 905 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 FRS2Q8WU20 508 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 OR8D1Q8WZ84 308 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 PTPRN2Q92932 1015 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 ISG20Q96AZ6 181 aaKnown RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 HMCESQ96FZ2 354 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 DESI2Q9BSY9 194 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 SLC39A8Q9C0K1 460 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 NOL6Q9H6R4 1146 aaKnown RBP11.25□□□□□ -0.61
CHD3-216ENST00000573936 ITM2CQ9NQX7 267 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 NCKAP1Q9Y2A7 1128 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 SPAG17Q6Q759 2223 aa11.25□□□□□ -0.61
CHD3-216ENST00000573936 LRRD1A4D1F6 860 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 C1QTNF3-AMACRE9PGA6 284 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 DFFAO00273 331 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 RHOBTB1O94844 696 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 MT-CO1P00395 513 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 KRT1P04264 644 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 CD48P09326 243 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 CCDC175P0C221 793 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 TNNT1P13805 278 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 IL4RP24394 825 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 DEKP35659 375 aaKnown RBP11.24□□□□□ -0.61
CHD3-216ENST00000573936 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 TTC31Q49AM3 519 aaPredicted RBP11.24□□□□□ -0.61
CHD3-216ENST00000573936 TMCO4Q5TGY1 634 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 FAM46CQ5VWP2 391 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 C22orf39Q6P5X5 142 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 LINGO4Q6UY18 593 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 ZNF662Q6ZS27 426 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 C12orf50Q8NA57 414 aaPredicted RBP11.24□□□□□ -0.61
CHD3-216ENST00000573936 RAPGEF5Q92565 580 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 FAF2Q96CS3 445 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 ERLEC1Q96DZ1 483 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 CELF6Q96J87 481 aaKnown RBP11.24□□□□□ -0.61
CHD3-216ENST00000573936 RNF157Q96PX1 679 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 MKRN2Q9H000 416 aaKnown RBP11.24□□□□□ -0.61
CHD3-216ENST00000573936 KLC2Q9H0B6 622 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 RSPH9Q9H1X1 276 aaPredicted RBP11.24□□□□□ -0.61
CHD3-216ENST00000573936 USP36Q9P275 1121 aaKnown RBP11.24□□□□□ -0.61
CHD3-216ENST00000573936 UBA2Q9UBT2 640 aaPredicted RBP11.24□□□□□ -0.61
CHD3-216ENST00000573936 SALL4Q9UJQ4 1053 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 AMFRQ9UKV5 643 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 DUSP10Q9Y6W6 482 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 DOCK4Q8N1I0 1966 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 ATG2BQ96BY7 2078 aa11.24□□□□□ -0.61
CHD3-216ENST00000573936 MACROD2A1Z1Q3 448 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 CCDC66A2RUB6 948 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 K7ERQ8 282 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 MCF2LO15068 1137 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 MAP3K13O43283 966 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 SMAD6O43541 496 aaKnown RBP11.23□□□□□ -0.61
CHD3-216ENST00000573936 GDF9O60383 454 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 PRAMEF11O60813 436 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 ZRANB2O95218 330 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHD3-216ENST00000573936 CD160O95971 181 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 ADH1BP00325 375 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 C5AR1P21730 350 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 RPS14P62263 151 aaKnown RBP11.23□□□□□ -0.61
CHD3-216ENST00000573936 SNRPD1P62314 119 aaKnown RBP11.23□□□□□ -0.61
CHD3-216ENST00000573936 RAD51Q06609 339 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 IL10RBQ08334 325 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 CCDC15Q0P6D6 951 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 RFTN1Q14699 578 aaPredicted RBP11.23□□□□□ -0.61
CHD3-216ENST00000573936 PAFAH1B3Q15102 231 aaKnown RBP11.23□□□□□ -0.61
CHD3-216ENST00000573936 ELF2Q15723 593 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 MAP7D1Q3KQU3 841 aa11.23□□□□□ -0.61
CHD3-216ENST00000573936 CARD16Q5EG05 197 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms