RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 MX2P20592 715 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 GLDCP23378 1020 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 PRKCHP24723 683 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 PAFAH1B1P43034 410 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 OTUD4Q01804 1114 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 CSTF1Q05048 431 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 ENPP2Q13822 863 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 PDK1Q15118 436 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 DLG2Q15700 870 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 HNRNPA1L2Q32P51 320 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 DNTTIP2Q5QJE6 756 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 LEKR1Q6ZMV7 388 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 ZC3H18Q86VM9 953 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 SH2D3CQ8N5H7 860 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 ATPAF2Q8N5M1 289 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 CAMKK1Q8N5S9 505 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 TTC13Q8NBP0 860 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 ACTL9Q8TC94 416 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 ACTRT1Q8TDG2 376 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 NSMCE1Q8WV22 266 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 C1orf54Q8WWF1 131 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 CASKIN2Q8WXE0 1202 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 CCDC114Q96M63 670 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 NAP1L3Q99457 506 aaPredicted RBP13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 LGMNQ99538 433 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 AP1M1Q9BXS5 423 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 TMEM245Q9H330 911 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 FBRSQ9HAH7 460 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 IPO11Q9UI26 975 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 FBXO4Q9UKT5 387 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 HS3ST2Q9Y278 367 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 R3HDM2Q9Y2K5 976 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 RAD54BQ9Y620 910 aa13.15□□□□□ -0.3
NPLOC4-214ENST00000573876 CHD5Q8TDI0 1954 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 TCRBV21S2A2A0A5A6 115 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 TTC34A8MYJ7 566 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 H7C0C1 242 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 PGRMC1O00264 195 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 ATP9BO43861 1147 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 MAFKO60675 156 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 PRAMEF11O60813 436 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 RNASEH1O60930 286 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 SRCP12931 536 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 CCNCP24863 283 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 GARSP41250 739 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 RECQLP46063 649 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 ATP5OP48047 213 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 SERPINH1P50454 418 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 NRLP54845 237 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 EIF3EP60228 445 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 ARF5P84085 180 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 IL10RBQ08334 325 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 GALNT2Q10471 571 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 AP1B1Q10567 949 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 SNX1Q13596 522 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 LINGO4Q6UY18 593 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 ZNF366Q8N895 744 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 HHIPQ96QV1 700 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 CEP44Q9C0F1 390 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 C10orf88Q9H8K7 445 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 PRMT8Q9NR22 394 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 BCCIPQ9P287 314 aaKnown RBP eCLIP13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 RNF14Q9UBS8 474 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 UBA2Q9UBT2 640 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 ACTL7AQ9Y615 435 aa13.14□□□□□ -0.31
NPLOC4-214ENST00000573876 KRIT1O00522 736 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 MT-CO1P00395 513 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 RBP3P10745 1247 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 XRCC4Q13426 336 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 NOMO1Q15155 1222 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 ANGPT1Q15389 498 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 SIX1Q15475 284 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 CCNG2Q16589 344 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 INO80DQ53TQ3 878 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 TMCO4Q5TGY1 634 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 DARS2Q6PI48 645 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 DSG4Q86SJ6 1040 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 BBS5Q8N3I7 341 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 PCDH20Q8N6Y1 951 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 OR2T3Q8NH03 318 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 TFB1MQ8WVM0 346 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 ATG4AQ8WYN0 398 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 MYO19Q96H55 970 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 OLFM3Q96PB7 478 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 TSGA13Q96PP4 275 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 FAM126AQ9BYI3 521 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 BRD8Q9H0E9 1235 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 POLR3BQ9NW08 1133 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 C2orf42Q9NWW7 574 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 CDC23Q9UJX2 597 aa13.13□□□□□ -0.31
NPLOC4-214ENST00000573876 A0A1W2PQF6 199 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 HACD1B0YJ81 288 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 K7ERQ8 282 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 K7ESF4 209 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 PDE2AO00408 941 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 PPP1R12AO14974 1030 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 MCF2LO15068 1137 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms