RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 CCDC105Q8IYK2 499 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 RASGEF1CQ8N431 466 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 SH2D3CQ8N5H7 860 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 ZNF366Q8N895 744 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 KDM1BQ8NB78 822 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 USP33Q8TEY7 942 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 C1orf54Q8WWF1 131 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 ATG4AQ8WYN0 398 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 MRGPRX3Q96LB0 322 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 TSGA13Q96PP4 275 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 QKIQ96PU8 341 aaKnown RBP eCLIP9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 ACOX2Q99424 681 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 AP1M1Q9BXS5 423 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 CEP44Q9C0F1 390 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 EPHX3Q9H6B9 360 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 PDFQ9HBH1 243 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 HOMER3Q9NSC5 361 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 SMARCAL1Q9NZC9 954 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 RNF14Q9UBS8 474 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 SEPT3Q9UH03 358 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 SUN2Q9UH99 717 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 SLCO3A1Q9UIG8 710 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 R3HDM2Q9Y2K5 976 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 ACTL7AQ9Y615 435 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 DOCK8Q8NF50 2099 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 PRUNE2Q8WUY3 3088 aa9.62□□□□□ -0.87
NPLOC4-208ENST00000572351 EDDM13A0A1B0GTR0 161 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 ANTXRLA6NF34 631 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 WASH3PC4AMC7 463 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 MATN3O15232 486 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 FANCGO15287 622 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 KCNN4O15554 427 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 MTSS1O43312 755 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 SMAD6O43541 496 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 ATP9BO43861 1147 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 IGSF6O95976 241 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 JCHAINP01591 159 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 CCNB1P14635 433 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 AOC1P19801 751 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 PRKCHP24723 683 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 MAGEA9P43362 315 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 SNRPD1P62314 119 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 ZNF33AQ06730 810 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 SLC10A7Q0GE19 358 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 BYSLQ13895 437 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 HNRNPDQ14103 355 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 PRKD1Q15139 912 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 CCNG2Q16589 344 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 HNRNPA1L2Q32P51 320 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 SLC45A4Q5BKX6 768 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 C22orf39Q6P5X5 142 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 Q6ZVU0 165 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 GSTA5Q7RTV2 222 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 ZNF687Q8N1G0 1237 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 PCDH20Q8N6Y1 951 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 IL17RCQ8NAC3 791 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 HTR3CQ8WXA8 447 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 MAGOHBQ96A72 148 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 ERLEC1Q96DZ1 483 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 EXOC2Q96KP1 924 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 GDAP1L1Q96MZ0 367 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 GABRG3Q99928 467 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 CEP41Q9BYV8 373 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 TM6SF2Q9BZW4 377 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 TNKS2Q9H2K2 1166 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 TMEM245Q9H330 911 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 RBM22Q9NW64 420 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 SPATA6Q9NWH7 488 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 KLHL8Q9P2G9 620 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 DNPEPQ9ULA0 475 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 ZNF148Q9UQR1 794 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 COL6A3P12111 3177 aa9.61□□□□□ -0.87
NPLOC4-208ENST00000572351 CFAP69A5D8W1 941 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 SGK1O00141 431 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 RNF103O00237 685 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 LIASO43766 372 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 ZNF500O60304 480 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 VAV1P15498 845 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 RBL1P28749 1068 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 ACTN2P35609 894 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 HSPA9P38646 679 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 RPS9P46781 194 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 CLCN5P51795 746 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 IFI35P80217 286 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 CKAP4Q07065 602 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 CYTH1Q15438 398 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 CARD16Q5EG05 197 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 DSG4Q86SJ6 1040 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 CREG2Q8IUH2 290 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 PAF1Q8N7H5 531 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 CCDC89Q8N998 374 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 FAM71DQ8N9W8 422 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 SLC35B2Q8TB61 432 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 OR8D1Q8WZ84 308 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 FATE1Q969F0 183 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 CLDN23Q96B33 292 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 AGAP3Q96P47 875 aa9.6□□□□□ -0.87
NPLOC4-208ENST00000572351 IER2Q9BTL4 223 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms