RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 LOC105369274A0A096LPK9 316 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 LOC102723532A0A0G2JNH3 316 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 FRAT2O75474 233 aaPredicted RBP4.52□□□□□ -1.69
NUP88-202ENST00000570937 CIAO1O76071 339 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 ENO1P06733 434 aaKnown RBP4.52□□□□□ -1.69
NUP88-202ENST00000570937 IFIT1P09914 478 aaKnown RBP4.52□□□□□ -1.69
NUP88-202ENST00000570937 TMEM191BP0C7N4 346 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 PRF1P14222 555 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 SLC8A1P32418 973 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 PPM1AP35813 382 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 IL15P40933 162 aaPredicted RBP4.52□□□□□ -1.69
NUP88-202ENST00000570937 STAT6P42226 847 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 HTR3AP46098 478 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 GMPSP49915 693 aaPredicted RBP4.52□□□□□ -1.69
NUP88-202ENST00000570937 CBFBQ13951 182 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 GRM4Q14833 912 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 P3H1Q32P28 736 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 EPHA10Q5JZY3 1008 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 TTLL5Q6EMB2 1281 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 C15orf52Q6ZUT6 534 aaKnown RBP4.52□□□□□ -1.69
NUP88-202ENST00000570937 TOGARAM2Q6ZUX3 1019 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 GLCCI1Q86VQ1 547 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 ITPRIPQ8IWB1 547 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 UEVLDQ8IX04 471 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 OR4N4Q8N0Y3 316 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 ACRBPQ8NEB7 543 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 IPO4Q8TEX9 1081 aaKnown RBP4.52□□□□□ -1.69
NUP88-202ENST00000570937 SLC22A17Q8WUG5 538 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 PIGKQ92643 395 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 HMCESQ96FZ2 354 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 FAR2Q96K12 515 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 ZFYVE19Q96K21 471 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 ELOVL1Q9BW60 279 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 ERVK-5Q9HDB9 667 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 ARFGAP3Q9NP61 516 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 CNOT7Q9UIV1 285 aaKnown RBP4.52□□□□□ -1.69
NUP88-202ENST00000570937 RIPOR2Q9Y4F9 1068 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 SNED1Q8TER0 1413 aa4.52□□□□□ -1.69
NUP88-202ENST00000570937 LAMB2P55268 1798 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 SLC22A23A1A5C7 686 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 GOLGA6L3A6NEY3 463 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 YDJCA8MPS7 323 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 EYA2O00167 538 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 PSMD14O00487 310 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 PIP5K1BO14986 540 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 IFIT2P09913 472 aaKnown RBP4.51□□□□□ -1.69
NUP88-202ENST00000570937 TFEBP19484 476 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 EPS15P42566 896 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 TECP42680 631 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 G3BP1Q13283 466 aaKnown RBP eCLIP4.51□□□□□ -1.69
NUP88-202ENST00000570937 MTA1Q13330 715 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 MTX1Q13505 466 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 PUM3Q15397 648 aaKnown RBP4.51□□□□□ -1.69
NUP88-202ENST00000570937 XRRA1Q6P2D8 792 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 FAM57BQ71RH2 274 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 TRABD2AQ86V40 505 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 ANKRD13BQ86YJ7 626 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 CNTROBQ8N137 903 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 TMEM57Q8N5G2 664 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 ANKRD44Q8N8A2 993 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 MPLKIPQ8TAP9 179 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 WDR60Q8WVS4 1066 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 RSC1A1Q92681 617 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 MUL1Q969V5 352 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 DCPSQ96C86 337 aaKnown RBP4.51□□□□□ -1.69
NUP88-202ENST00000570937 TRMT61AQ96FX7 289 aaKnown RBP4.51□□□□□ -1.69
NUP88-202ENST00000570937 TRMOQ9BU70 441 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 TP63Q9H3D4 680 aaPredicted RBP4.51□□□□□ -1.69
NUP88-202ENST00000570937 EPS8L2Q9H6S3 715 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 CD209Q9NNX6 404 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 DDX19BQ9UMR2 479 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 NFU1Q9UMS0 254 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 PCDHB7Q9Y5E2 793 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 LRRFIP2Q9Y608 721 aaKnown RBP4.51□□□□□ -1.69
NUP88-202ENST00000570937 CACNA1IQ9P0X4 2223 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 CACNA1SQ13698 1873 aa4.51□□□□□ -1.69
NUP88-202ENST00000570937 DICER1Q9UPY3 1922 aaKnown RBP4.5□□□□□ -1.69
NUP88-202ENST00000570937 EMSYQ7Z589 1322 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 WDR90Q96KV7 1748 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 NKX2-8O15522 239 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 HMMRO75330 724 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 CER1O95813 267 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 BMP15O95972 392 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 ST6GAL1P15907 406 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 CPA2P48052 419 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 ALDH18A1P54886 795 aaKnown RBP4.5□□□□□ -1.69
NUP88-202ENST00000570937 FKBP1AP62942 108 aaKnown RBP4.5□□□□□ -1.69
NUP88-202ENST00000570937 B4GALNT1Q00973 533 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 OS9Q13438 667 aaPredicted RBP4.5□□□□□ -1.69
NUP88-202ENST00000570937 STARD3Q14849 445 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 AAK1Q2M2I8 961 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 HSP90AB4PQ58FF6 505 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 ZNF474Q6S9Z5 364 aaPredicted RBP4.5□□□□□ -1.69
NUP88-202ENST00000570937 NRSN1Q8IZ57 195 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 NRACQ8N912 160 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 TBC1D22AQ8WUA7 517 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 ZFPM2Q8WW38 1151 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 VCPIP1Q96JH7 1222 aa4.5□□□□□ -1.69
NUP88-202ENST00000570937 MEIS3Q99687 375 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms