RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ZNF707Q96C28 371 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 LRRC40Q9H9A6 602 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 IL1RAPL1Q9NZN1 696 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 C2orf16Q68DN1 1984 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 PRRC2BQ5JSZ5 2229 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 TSHRP16473 764 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 PTPN2P17706 415 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 RENBPP51606 427 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 PPP2R2AP63151 447 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 ZNF177Q13360 481 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 PRPSAP1Q14558 356 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 CARNMT1Q8N4J0 409 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 TEX26Q8N6G2 289 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 C12orf76Q8N812 135 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 MDM1Q8TC05 714 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 FATE1Q969F0 183 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 FICDQ9BVA6 458 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 MAGEH1Q9H213 219 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 PLK2Q9NYY3 685 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 SLC17A6Q9P2U8 582 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 ERI2A8K979 691 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 UGT1A9O60656 530 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 LATS1O95835 1130 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 MMP2P08253 660 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 GUCY1A3Q02108 690 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 ITKQ08881 620 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 LBRQ14739 615 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 RNF219Q5W0B1 726 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 FAM217AQ8IXS0 508 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 DCAKDQ8WVC6 231 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 ING5Q8WYH8 240 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 MRGPRX2Q96LB1 330 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 DHRS4Q9BTZ2 278 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 KIF9Q9HAQ2 790 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 UGT1A7Q9HAW7 530 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 UGT1A10Q9HAW8 530 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 UGT1A8Q9HAW9 530 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 TBC1D30Q9Y2I9 924 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 SH3BP1Q9Y3L3 701 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 XIRP2A4UGR9 3374 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 FAM155BO75949 473 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 PRAMEF12O95522 483 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 C1RP00736 705 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 MZF1P28698 734 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 CD86P42081 329 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 IFNAR2P48551 515 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 SKOR1P84550 965 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 GABPB1Q06547 395 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 PCSK7Q16549 785 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 PRSS36Q5K4E3 855 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 HTR3DQ70Z44 454 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 TDRPQ86YL5 185 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 CMTM8Q8IZV2 173 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 GSDMBQ8TAX9 411 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 SH3RF2Q8TEC5 729 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 CYTH2Q99418 400 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 DDX50Q9BQ39 737 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 TBL1YQ9BQ87 522 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 ATP13A1Q9HD20 1204 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 LSM7Q9UK45 103 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 CLEC4EQ9ULY5 219 aa11.12□□□□□ -0.63
PDXDC1-216ENST00000569715 CCDC195A0A1B0GUA6 201 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 ILVBLA1L0T0 632 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 ATP9BO43861 1147 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 HOXA9P31269 272 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 ADRA1AP35348 466 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 CHRNA4P43681 627 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 KLHL38Q2WGJ6 581 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 TMCO4Q5TGY1 634 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 STEAP4Q687X5 459 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 DENND5AQ6IQ26 1287 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 KDELC1Q6UW63 502 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 TPGS1Q6ZTW0 290 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 HJURPQ8NCD3 748 aaPredicted RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 VN1R2Q8NFZ6 395 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 IMP4Q96G21 291 aaKnown RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 ZSWIM3Q96MP5 696 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 SAMD11Q96NU1 681 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 SELENOSQ9BQE4 189 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 SLC25A51Q9H1U9 297 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 PSMC3IPQ9P2W1 217 aaPredicted RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 AAR2Q9Y312 384 aaKnown RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 CCDC78A2IDD5 438 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 RFXAPO00287 272 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 SNAP91O60641 907 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 SPAG6O75602 509 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 ANXA9O76027 345 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 STX2P32856 288 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 NRIP1P48552 1158 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 CRYMQ14894 314 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 EMC10Q5UCC4 262 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 SRRM1Q8IYB3 904 aaKnown RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 TDRD5Q8NAT2 981 aaKnown RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 ARRDC2Q8TBH0 407 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 USP13Q92995 863 aaPredicted RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 TMA16Q96EY4 203 aaKnown RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 FCRL3Q96P31 734 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms