RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 DCAF12Q5T6F0 453 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 PIP5KL1Q5T9C9 394 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 SLC6A19Q695T7 634 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 KCNK18Q7Z418 384 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 ZNF438Q7Z4V0 828 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 SCD5Q86SK9 330 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 PIM3Q86V86 326 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 FUKQ8N0W3 1084 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 FSTL5Q8N475 847 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 GPR156Q8NFN8 814 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 FIBINQ8TAL6 211 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 SNX29Q8TEQ0 813 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 PLD4Q96BZ4 506 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 FAM84AQ96KN4 292 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 BARD1Q99728 777 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 MED10Q9BTT4 135 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 BRMS1Q9HCU9 246 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 DLL4Q9NR61 685 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 KRT82Q9NSB4 513 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 LUZP4Q9P127 313 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 SIRPGQ9P1W8 387 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 NAGPAQ9UK23 515 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 ZFR2Q9UPR6 939 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 RPH3AQ9Y2J0 694 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 KIF3AQ9Y496 699 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 ZNF451Q9Y4E5 1061 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 TMEM184BQ9Y519 407 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 MRPS18BQ9Y676 258 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 HHLA1C9JL84 531 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 C1QTNF3-AMACRE9PGA6 284 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 M0QYT0 321 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 LATS1O95835 1130 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 TMEM191BP0C7N4 346 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 KLK2P20151 261 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 F8A1P23610 371 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 NFKBIAP25963 317 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 STAT5AP42229 794 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 CTSOP43234 321 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 MAP3K7CLP57077 242 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 PFN3P60673 137 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 ECT2LQ008S8 904 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 CCDC15Q0P6D6 951 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 ORC2Q13416 577 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 ERV3-1Q14264 604 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 MAP9Q49MG5 647 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 VWA2Q5GFL6 755 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 ADGRF1Q5T601 910 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 BLOC1S2Q6QNY1 142 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 LINGO4Q6UY18 593 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 BNC2Q6ZN30 1099 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 GPRIN1Q7Z2K8 1008 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 CCDC186Q7Z3E2 898 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 KDELC2Q7Z4H8 507 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 IQCKQ8N0W5 287 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 NXPE1Q8N323 547 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 RBMXL3Q8N7X1 1067 aaKnown RBP6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 Q8N9G6 341 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 AGBL5Q8NDL9 886 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 RCBTB1Q8NDN9 531 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 ST6GALNAC3Q8NDV1 305 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 PCDH19Q8TAB3 1148 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 POMGNT1Q8WZA1 660 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 RTP4Q96DX8 246 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 ANKRD36BP1Q96IX9 119 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 FIZ1Q96SL8 496 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 TRIM55Q9BYV6 548 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 SLC13A1Q9BZW2 595 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 CXXC4Q9H2H0 198 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 SLC39A1Q9NY26 324 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 ODF2LQ9ULJ1 636 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 PNMA8BQ9ULN7 279 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 STRIP2Q9ULQ0 834 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 DOLKQ9UPQ8 538 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 GTF3C1Q12789 2109 aa6.79□□□□□ -1.32
HERPUD1-217ENST00000569429 DOCK10Q96BY6 2186 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 IGHV5-10-1A0A0J9YXX1 117 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 A0A1B0GUH1 482 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 A6NCN8 305 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 ALOX15BO15296 676 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 RAD51BO15315 384 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 KCNN4O15554 427 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 CDC45O75419 566 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 PAK4O96013 591 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 LDHAP00338 332 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 IGHDP01880 384 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 CELA2BP08218 269 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 ALPIP09923 528 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 VAV1P15498 845 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 RPS6KB1P23443 525 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 HTR1EP28566 365 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 SGSHP51688 502 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 KIF11P52732 1056 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 ZNF131P52739 623 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 SLC12A3P55017 1021 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 PPP2R2AP63151 447 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 B4GALNT1Q00973 533 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 MAP7Q14244 749 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 ELOCQ15369 112 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 CERCAMQ5T4B2 595 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 PIK3R6Q5UE93 754 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms