RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TIFABQ6ZNK6 161 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CCNJLQ8IV13 435 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 SLC41A1Q8IVJ1 513 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 SAMD14Q8IZD0 417 aaPredicted RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 ATPAF2Q8N5M1 289 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 DNAJC9Q8WXX5 260 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 VPS39Q96JC1 886 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 NAT9Q9BTE0 207 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 FICDQ9BVA6 458 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PPP1R12CQ9BZL4 782 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 GBA3Q9H227 469 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 WDR55Q9H6Y2 383 aaPredicted RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 EIF2B3Q9NR50 452 aaKnown RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 NMRK1Q9NWW6 199 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 SLC2A6Q9UGQ3 507 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CAPN14A8MX76 684 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 CCL22O00626 93 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SIN3BO75182 1162 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 ZNF24P17028 368 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SERPINB5P36952 375 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 GPR15P49685 360 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 IDH3AP50213 366 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 ATXN3P54252 364 aaPredicted RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 DDR2Q16832 855 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SPDYAQ5MJ70 313 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 PDPK2PQ6A1A2 396 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 ITPRIPL1Q6GPH6 555 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 ESRP1Q6NXG1 681 aaKnown RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 RIPOR1Q6ZS17 1223 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 ULK2Q8IYT8 1036 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 TMEM86AQ8N2M4 240 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 PHTF2Q8N3S3 785 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 CCNYL1Q8N7R7 359 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 KCTD4Q8WVF5 259 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 NRG4Q8WWG1 115 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SCG3Q8WXD2 468 aaKnown RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 MARK4Q96L34 752 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 TEKT5Q96M29 485 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SORT1Q99523 831 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 MTG1Q9BT17 334 aaPredicted RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 CCDC106Q9BWC9 280 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 OSBPL1AQ9BXW6 950 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SLC7A5P2Q9GIP4 190 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 NACA2Q9H009 215 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 TLE6Q9H808 572 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 TRMT13Q9NUP7 481 aaKnown RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 STOML1Q9UBI4 398 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 GABRQQ9UN88 632 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 RUVBL2Q9Y230 463 aaKnown RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 NUP205Q92621 2012 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 NVLO15381 856 aaKnown RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 PAGE1O75459 146 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SOAT2O75908 522 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 F9P00740 461 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SERPINA6P08185 405 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SERPINB8P50452 374 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 LIMK2P53671 638 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SLC5A3P53794 718 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SEMA3BQ13214 749 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 CUL3Q13618 768 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SLC9B1Q4ZJI4 515 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SLC39A12Q504Y0 691 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 TCHHL1Q5QJ38 904 aaPredicted RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 FAM219BQ5XKK7 198 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 BHLHA9Q7RTU4 235 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SPATA2LQ8IUW3 424 aaPredicted RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 ARHGAP24Q8N264 748 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 CASP10Q92851 521 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 FCRL2Q96LA5 508 aaPredicted RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 FSD1LQ9BXM9 530 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SLC39A8Q9C0K1 460 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 COG4Q9H9E3 785 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 NMRAL1Q9HBL8 299 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 DMAP1Q9NPF5 467 aaPredicted RBP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 RBM22Q9NW64 420 aaKnown RBP eCLIP8.9□□□□□ -0.98
LINC00558-201ENST00000569422 SLC7A8Q9UHI5 535 aa8.9□□□□□ -0.98
LINC00558-201ENST00000569422 GPR182O15218 404 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 ASGR1P07306 291 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 MPSTP25325 297 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 CXCR3P49682 368 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 TUBP50607 506 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 NAGLUP54802 743 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 CDH17Q12864 832 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 CRHR2Q13324 411 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 ITGA7Q13683 1181 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 CNGA3Q16281 694 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 C6orf163Q5TEZ5 329 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 SMYD5Q6GMV2 418 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 TMEM135Q86UB9 458 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 ZSCAN18Q8TBC5 510 aaPredicted RBP8.89□□□□□ -0.99
LINC00558-201ENST00000569422 MAPK15Q8TD08 544 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 ACMSDQ8TDX5 336 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 PYDC1Q8WXC3 89 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 APBB2Q92870 758 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 NTAN1Q96AB6 310 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 NACC2Q96BF6 587 aa8.89□□□□□ -0.99
LINC00558-201ENST00000569422 PABPC5Q96DU9 382 aaKnown RBP8.89□□□□□ -0.99
LINC00558-201ENST00000569422 ZNF419Q96HQ0 510 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms