RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	IGSF21	Q96ID5	467 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	GFM1	Q96RP9	751 aa	Known RBP	3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	PDE11A	Q9HCR9	933 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	TMLHE	Q9NVH6	421 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	PCDHGB2	Q9Y5G2	931 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	WDR81	Q562E7	1941 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	IGLV5-52	A0A0A0MRZ9	124 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	EYA2	O00167	538 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	HNRNPR	O43390	633 aa	Known RBP	3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	F7	P08709	466 aa	Predicted RBP	3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	AKT1	P31749	480 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	CLCN5	P51795	746 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	CLCNKB	P51801	687 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	ADORA2A-AS1	P86434	159 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	PTK2B	Q14289	1009 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	MRGPRG-AS1	Q2M3A8	158 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM76B	Q5HYJ3	339 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	ATPAF1	Q5TC12	328 aa	Predicted RBP	3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	TMEM268	Q5VZI3	342 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	NFRKB	Q6P4R8	1299 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	SERPINA11	Q86U17	422 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	FJX1	Q86VR8	437 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	PALB2	Q86YC2	1186 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	RBFA	Q8N0V3	343 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	MUC20	Q8N307	709 aa	Predicted RBP	3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	SVIP	Q8NHG7	77 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM71B	Q8TC56	605 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	FAR1	Q8WVX9	515 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	INPP4A	Q96PE3	977 aa	Predicted RBP	3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	RETREG1	Q9H6L5	497 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	ARFGAP3	Q9NP61	516 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	NLRC4	Q9NPP4	1024 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	PCDHA10	Q9Y5I2	948 aa		3.6	□□□□□ -1.83
UBR1-209	ENST00000569243	CCNT1	O60563	726 aa	Known RBP	3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	SERPINI2	O75830	405 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	PEPD	P12955	493 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	GSTM2	P28161	218 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	PPM1A	P35813	382 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	TEC	P42680	631 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	NEK3	P51956	506 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	RNASEL	Q05823	741 aa	Known RBP	3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	CDK18	Q07002	472 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC39A14	Q15043	492 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	IL31	Q6EBC2	164 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	MTFR2	Q6P444	385 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	DSTYK	Q6XUX3	929 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	NEK10	Q6ZWH5	1172 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	RAB11FIP2	Q7L804	512 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	SRL	Q86TD4	932 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	SYTL1	Q8IYJ3	562 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM186B	Q8IYM0	893 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	PARD3B	Q8TEW8	1205 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	MUL1	Q969V5	352 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	C18orf8	Q96DM3	657 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	TEFM	Q96QE5	360 aa	Known RBP	3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	PIGS	Q96S52	555 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	ELAC2	Q9BQ52	826 aa	Known RBP	3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	TRIM31	Q9BZY9	425 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	FNIP2	Q9P278	1114 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	FBXO40	Q9UH90	709 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC25A13	Q9UJS0	675 aa		3.59	□□□□□ -1.83
UBR1-209	ENST00000569243		A0A0U1RQJ8	604 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	BMPR1B	O00238	502 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	FFAR2	O15552	330 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	ASNA1	O43681	348 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	DDAH2	O95865	285 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	FCGR2A	P12318	317 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	ABCB4	P21439	1286 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	ANOS1	P23352	680 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	TYK2	P29597	1187 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	THPO	P40225	353 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	DCTN1	Q14203	1278 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	SPARCL1	Q14515	664 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	SYTL3	Q4VX76	610 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	GALNT7	Q86SF2	657 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	EXOC3L1	Q86VI1	746 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	TMED6	Q8WW62	240 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	RTKN	Q9BST9	563 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	IFT27	Q9BW83	186 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	HDHD5	Q9BXW7	423 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	CADM1	Q9BY67	442 aa	Known RBP	3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	BAG5	Q9UL15	447 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	C19orf53	Q9UNZ5	99 aa	Predicted RBP	3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	LZTS1	Q9Y250	596 aa		3.58	□□□□□ -1.84
UBR1-209	ENST00000569243	IGLV5-37	A0A075B6J1	123 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	MAGEA13P	A6NCF6	341 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	AGAP5	A6NIR3	686 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	GRM8	O00222	908 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	SYT5	O00445	386 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	ITM2A	O43736	263 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	PLIN1	O60240	522 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	HEXIM1	O94992	359 aa	Known RBP	3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	IGLV2-11	P01706	119 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	HTR3A	P46098	478 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	RPS6KA3	P51812	740 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	BNC1	Q01954	994 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	ST3GAL1	Q11201	340 aa		3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	GRSF1	Q12849	480 aa	Known RBP eCLIP	3.57	□□□□□ -1.84
UBR1-209	ENST00000569243	STARD3	Q14849	445 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms