RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 LATO43561 262 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 RAMP2O60895 175 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 PRNPP04156 253 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 MYBL1P10243 752 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 PSMA2P25787 234 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 EPHB2P29323 1055 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 RECQLP46063 649 aaPredicted RBP20.71■□□□□ 0.91
CLK3-225ENST00000569063 GEMIN4P57678 1058 aaKnown RBP20.71■□□□□ 0.91
CLK3-225ENST00000569063 ZBED6P86452 979 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 POLD3Q15054 466 aaPredicted RBP20.71■□□□□ 0.91
CLK3-225ENST00000569063 KIF19Q2TAC6 998 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 POM121L1PQ3SYA9 428 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 DPY19L3Q6ZPD9 716 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 PLPP6Q8IY26 295 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 RTL3Q8N8U3 475 aaKnown RBP20.71■□□□□ 0.91
CLK3-225ENST00000569063 CHST14Q8NCH0 376 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 ISG20Q96AZ6 181 aaKnown RBP20.71■□□□□ 0.91
CLK3-225ENST00000569063 TRIM11Q96F44 468 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 EPAS1Q99814 870 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 IL21RQ9HBE5 538 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 IFNKQ9P0W0 207 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 CNOT8Q9UFF9 292 aaKnown RBP20.71■□□□□ 0.91
CLK3-225ENST00000569063 IL36AQ9UHA7 158 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 HPCAL4Q9UM19 191 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 SNX11Q9Y5W9 270 aa20.71■□□□□ 0.91
CLK3-225ENST00000569063 ASCC3Q8N3C0 2202 aaKnown RBP20.71■□□□□ 0.91
CLK3-225ENST00000569063 WASH4PA8MWX3 477 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 VILLO15195 856 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 KDELR3O43731 214 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 CREB3O43889 395 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 HTR7P34969 479 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 ZNF252P-AS1Q0IIN9 211 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 CCDC15Q0P6D6 951 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 HNRNPDQ14103 355 aaKnown RBP20.7■□□□□ 0.9
CLK3-225ENST00000569063 ARFGAP1Q8N6T3 406 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 ZNF653Q96CK0 615 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 NOL6Q9H6R4 1146 aaKnown RBP20.7■□□□□ 0.9
CLK3-225ENST00000569063 CATSPERBQ9H7T0 1116 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 ARHGAP20Q9P2F6 1191 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 ACTL7AQ9Y615 435 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 SCINQ9Y6U3 715 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 CHD5Q8TDI0 1954 aa20.7■□□□□ 0.9
CLK3-225ENST00000569063 KPNA3O00505 521 aaPredicted RBP20.69■□□□□ 0.9
CLK3-225ENST00000569063 SERPING1P05155 500 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 NUDT1P36639 197 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 YBEYP58557 167 aaPredicted RBP20.69■□□□□ 0.9
CLK3-225ENST00000569063 TAS2R38P59533 333 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 PPP2CBP62714 309 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 PPP2CAP67775 309 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 SHC2P98077 582 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 CARD16Q5EG05 197 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 ARSIQ5FYB1 569 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 KCNT1Q5JUK3 1230 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 PIP5KL1Q5T9C9 394 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 DBX2Q6ZNG2 339 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 ADAT2Q7Z6V5 191 aaKnown RBP20.69■□□□□ 0.9
CLK3-225ENST00000569063 TRIM69Q86WT6 500 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 CPLX3Q8WVH0 158 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 ARRDC3Q96B67 414 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 SLC6A18Q96N87 628 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 PREBQ9HCU5 417 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 MRPL47Q9HD33 250 aaKnown RBP20.69■□□□□ 0.9
CLK3-225ENST00000569063 TM7SF3Q9NS93 570 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 FNDC3AQ9Y2H6 1198 aaKnown RBP20.69■□□□□ 0.9
CLK3-225ENST00000569063 FCF1Q9Y324 198 aaKnown RBP20.69■□□□□ 0.9
CLK3-225ENST00000569063 LUC7L2Q9Y383 392 aaKnown RBP20.69■□□□□ 0.9
CLK3-225ENST00000569063 PCDHGB2Q9Y5G2 931 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 WASF2Q9Y6W5 498 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 NCOR2Q9Y618 2525 aa20.69■□□□□ 0.9
CLK3-225ENST00000569063 ZSCAN5CA6NGD5 496 aaPredicted RBP20.68■□□□□ 0.9
CLK3-225ENST00000569063 EIF3CLB5ME19 914 aaKnown RBP20.68■□□□□ 0.9
CLK3-225ENST00000569063 RNF103O00237 685 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 FGF10O15520 208 aaPredicted RBP20.68■□□□□ 0.9
CLK3-225ENST00000569063 SH3BP5O60239 455 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 LEFTY1O75610 366 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 RNF8O76064 485 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 CTSKP43235 329 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 TDRD12Q587J7 1177 aaKnown RBP20.68■□□□□ 0.9
CLK3-225ENST00000569063 ERMARDQ5T6L9 678 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 LAYNQ6UX15 382 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 PRPF39Q86UA1 669 aaKnown RBP20.68■□□□□ 0.9
CLK3-225ENST00000569063 VPS36Q86VN1 386 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 NAXDQ8IW45 347 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 UMODL1-AS1Q8N2C9 162 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 SKA1Q96BD8 255 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 PPP1R16AQ96I34 528 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 SERAC1Q96JX3 654 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 EIF3CQ99613 913 aaKnown RBP20.68■□□□□ 0.9
CLK3-225ENST00000569063 HEPHQ9BQS7 1158 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 HDAC8Q9BY41 377 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 TRIM7Q9C029 511 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 DYRK4Q9NR20 520 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 AP4E1Q9UPM8 1137 aa20.68■□□□□ 0.9
CLK3-225ENST00000569063 PLXNA2O75051 1894 aa20.67■□□□□ 0.9
CLK3-225ENST00000569063 A0A1W2PR77 199 aa20.67■□□□□ 0.9
CLK3-225ENST00000569063 WNT9AO14904 365 aa20.67■□□□□ 0.9
CLK3-225ENST00000569063 GYPCP04921 128 aa20.67■□□□□ 0.9
CLK3-225ENST00000569063 TPM3P06753 285 aa20.67■□□□□ 0.9
CLK3-225ENST00000569063 CD38P28907 300 aa20.67■□□□□ 0.9
CLK3-225ENST00000569063 DNA2P51530 1060 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms