RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 PKN3Q6P5Z2 889 aa23.12■■□□□ 1.29
UBFD1-208ENST00000567264 BBS5Q8N3I7 341 aa23.12■■□□□ 1.29
UBFD1-208ENST00000567264 FBXL6Q8N531 539 aa23.12■■□□□ 1.29
UBFD1-208ENST00000567264 ZNF366Q8N895 744 aa23.12■■□□□ 1.29
UBFD1-208ENST00000567264 MS4A14Q96JA4 679 aa23.12■■□□□ 1.29
UBFD1-208ENST00000567264 GABRG3Q99928 467 aa23.12■■□□□ 1.29
UBFD1-208ENST00000567264 FAM118BQ9BPY3 351 aa23.12■■□□□ 1.29
UBFD1-208ENST00000567264 FRMD8P1Q9BZ68 369 aaPredicted RBP23.12■■□□□ 1.29
UBFD1-208ENST00000567264 TTC7AQ9ULT0 858 aaPredicted RBP23.12■■□□□ 1.29
UBFD1-208ENST00000567264 FCF1Q9Y324 198 aaKnown RBP23.12■■□□□ 1.29
UBFD1-208ENST00000567264 ATG2BQ96BY7 2078 aa23.12■■□□□ 1.29
UBFD1-208ENST00000567264 MUC22E2RYF6 1773 aaPredicted RBP23.12■■□□□ 1.29
UBFD1-208ENST00000567264 EDDM13A0A1B0GTR0 161 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 SGK1O00141 431 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 ZNF185O15231 689 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 MATN3O15232 486 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 SMAD6O43541 496 aaKnown RBP23.11■■□□□ 1.29
UBFD1-208ENST00000567264 SYNCRIPO60506 623 aaKnown RBP23.11■■□□□ 1.29
UBFD1-208ENST00000567264 GAS6Q14393 721 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 LBRQ14739 615 aaKnown RBP23.11■■□□□ 1.29
UBFD1-208ENST00000567264 HNRNPA1L2Q32P51 320 aaKnown RBP23.11■■□□□ 1.29
UBFD1-208ENST00000567264 CDKL3Q8IVW4 592 aaPredicted RBP23.11■■□□□ 1.29
UBFD1-208ENST00000567264 SPEM1Q8N4L4 309 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 ACTRT1Q8TDG2 376 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 LRRN4Q8WUT4 740 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 FATE1Q969F0 183 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 QKIQ96PU8 341 aaKnown RBP eCLIP23.11■■□□□ 1.29
UBFD1-208ENST00000567264 FERMT1Q9BQL6 677 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 CINPQ9BW66 212 aaPredicted RBP23.11■■□□□ 1.29
UBFD1-208ENST00000567264 SEPT3Q9UH03 358 aa23.11■■□□□ 1.29
UBFD1-208ENST00000567264 MYO18AQ92614 2054 aaKnown RBP23.1■■□□□ 1.29
UBFD1-208ENST00000567264 ADAM23O75077 832 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 NEBLO76041 1014 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 RBP3P10745 1247 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 RHOAP61586 193 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 HNRNPDQ14103 355 aaKnown RBP23.1■■□□□ 1.29
UBFD1-208ENST00000567264 ZNF235Q14590 738 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 PRKD1Q15139 912 aaPredicted RBP23.1■■□□□ 1.29
UBFD1-208ENST00000567264 SLC45A4Q5BKX6 768 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 MARC1Q5VT66 337 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 SYT13Q7L8C5 426 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 PCDH20Q8N6Y1 951 aaKnown RBP23.1■■□□□ 1.29
UBFD1-208ENST00000567264 FRS2Q8WU20 508 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 ZNF592Q92610 1267 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 ISG20Q96AZ6 181 aaKnown RBP23.1■■□□□ 1.29
UBFD1-208ENST00000567264 CCDC114Q96M63 670 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 DLGAP2Q9P1A6 1054 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 R3HDM2Q9Y2K5 976 aaKnown RBP23.1■■□□□ 1.29
UBFD1-208ENST00000567264 BDP1A6H8Y1 2624 aa23.1■■□□□ 1.29
UBFD1-208ENST00000567264 TARSL2A2RTX5 802 aaKnown RBP23.09■■□□□ 1.29
UBFD1-208ENST00000567264 FAM86C2PA6NEL3 165 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 ZNF189O75820 626 aaPredicted RBP23.09■■□□□ 1.29
UBFD1-208ENST00000567264 PEX11BO96011 259 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 MMP13P45452 471 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 RECQLP46063 649 aaPredicted RBP23.09■■□□□ 1.29
UBFD1-208ENST00000567264 RENBPP51606 427 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 SLC10A7Q0GE19 358 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 MTAPQ13126 283 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 CYTH1Q15438 398 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 DARS2Q6PI48 645 aaKnown RBP23.09■■□□□ 1.29
UBFD1-208ENST00000567264 Q6ZVU0 165 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 B4GALNT4Q76KP1 1039 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 MAML1Q92585 1016 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 CAPZA3Q96KX2 299 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 TNKS2Q9H2K2 1166 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 MTG2Q9H4K7 406 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 HAUS2Q9NVX0 235 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 SEPT10Q9P0V9 454 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 SHROOM3Q8TF72 1996 aa23.09■■□□□ 1.29
UBFD1-208ENST00000567264 KCNK1O00180 336 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 MTSS1O43312 755 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 BNIP3LO60238 219 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 CCNB1P14635 433 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 SIX1Q15475 284 aaPredicted RBP23.08■■□□□ 1.29
UBFD1-208ENST00000567264 HEATR6Q6AI08 1181 aaKnown RBP23.08■■□□□ 1.29
UBFD1-208ENST00000567264 SLC35B2Q8TB61 432 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 C1orf54Q8WWF1 131 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 ATG4AQ8WYN0 398 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 TM6SF2Q9BZW4 377 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 HOMER3Q9NSC5 361 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 SMARCAL1Q9NZC9 954 aa23.08■■□□□ 1.29
UBFD1-208ENST00000567264 FARP1Q9Y4F1 1045 aaPredicted RBP23.08■■□□□ 1.29
UBFD1-208ENST00000567264 GOLGA6L10A0A0M3HER8 536 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 SIN3BO75182 1162 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 IGSF6O95976 241 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 GSRP00390 522 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 JCHAINP01591 159 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 VAV1P15498 845 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 HSPA9P38646 679 aaKnown RBP23.07■■□□□ 1.28
UBFD1-208ENST00000567264 PAFAH1B1P43034 410 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 SNRPD1P62314 119 aaKnown RBP23.07■■□□□ 1.28
UBFD1-208ENST00000567264 IFI35P80217 286 aaPredicted RBP23.07■■□□□ 1.28
UBFD1-208ENST00000567264 CRY1Q16526 586 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 CCNG2Q16589 344 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 RYBPQ8N488 228 aaPredicted RBP23.07■■□□□ 1.28
UBFD1-208ENST00000567264 TMEM105Q8N8V8 129 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 HTR3CQ8WXA8 447 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 PTPRN2Q92932 1015 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 GDAP1L1Q96MZ0 367 aa23.07■■□□□ 1.28
UBFD1-208ENST00000567264 PSKH2Q96QS6 385 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms