RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TRIM72Q6ZMU5 477 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 DPY19L3Q6ZPD9 716 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 IQCHQ86VS3 1027 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 PROSER1Q86XN7 944 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 DRC7Q8IY82 874 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 MAGEB5Q9BZ81 275 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 ERVMER34-1Q9H9K5 563 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 ATP13A1Q9HD20 1204 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 NDFIP2Q9NV92 336 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 LIMA1Q9UHB6 759 aaKnown RBP18.72■□□□□ 0.59
USB1-213ENST00000566292 LAMA5O15230 3695 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 APC2O95996 2303 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 ACACAQ13085 2346 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 LGALS16A8MUM7 142 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 FAM72CH0Y354 149 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 YKT6O15498 198 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 RNGTTO60942 597 aaKnown RBP18.71■□□□□ 0.59
USB1-213ENST00000566292 PRNPP04156 253 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 ITGAVP06756 1048 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 SDC4P31431 198 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 ADRA1BP35368 520 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 PTPN9P43378 593 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 RXRGP48443 463 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 SERPINH1P50454 418 aaKnown RBP18.71■□□□□ 0.59
USB1-213ENST00000566292 MYL5Q02045 173 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 SETMARQ53H47 684 aaPredicted RBP18.71■□□□□ 0.59
USB1-213ENST00000566292 CCDC157Q569K6 752 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 ARSIQ5FYB1 569 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 FAM72AQ5TYM5 149 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 FAM72DQ6L9T8 149 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 KANSL1Q7Z3B3 1105 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 FAM72BQ86X60 149 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 GRIN3AQ8TCU5 1115 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 CENPIQ92674 756 aaPredicted RBP18.71■□□□□ 0.59
USB1-213ENST00000566292 KLK6Q92876 244 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 GBP4Q96PP9 640 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 HSD3B7Q9H2F3 369 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 ANO10Q9NW15 660 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 OR12D3Q9UGF7 316 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 IL36AQ9UHA7 158 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 NEU3Q9UQ49 428 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 ACTL7AQ9Y615 435 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 WASF2Q9Y6W5 498 aa18.71■□□□□ 0.59
USB1-213ENST00000566292 A0A1W2PQU0 124 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 PRAMEF26H0Y7S4 382 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 LEFTY1O75610 366 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 CD160O95971 181 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 PRLRP16471 622 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 ACVRL1P37023 503 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 ARRB1P49407 418 aaPredicted RBP18.7■□□□□ 0.58
USB1-213ENST00000566292 HDAC4P56524 1084 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 GSCP56915 257 aaPredicted RBP18.7■□□□□ 0.58
USB1-213ENST00000566292 SLC20A2Q08357 652 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 STAT4Q14765 748 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 NCAPHQ15003 741 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 CLEC16AQ2KHT3 1053 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 RETSATQ6NUM9 610 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 NEK5Q6P3R8 708 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 SASS6Q6UVJ0 657 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 ERN2Q76MJ5 926 aaKnown RBP18.7■□□□□ 0.58
USB1-213ENST00000566292 STRADAQ7RTN6 431 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 APTXQ7Z2E3 356 aaKnown RBP18.7■□□□□ 0.58
USB1-213ENST00000566292 NLRP14Q86W24 1093 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 EID2Q8N6I1 236 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 CCDC185Q8N715 623 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 TMEM145Q8NBT3 493 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 NEK11Q8NG66 645 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 MYOCQ99972 504 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 HDAC8Q9BY41 377 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 CEP44Q9C0F1 390 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 OSBPL2Q9H1P3 480 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 ZFR2Q9UPR6 939 aaKnown RBP18.7■□□□□ 0.58
USB1-213ENST00000566292 FCF1Q9Y324 198 aaKnown RBP18.7■□□□□ 0.58
USB1-213ENST00000566292 KNTC1P50748 2209 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 MYLKQ15746 1914 aa18.7■□□□□ 0.58
USB1-213ENST00000566292 FAM149AA5PLN7 773 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 ENC1O14682 589 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 SLC31A1O15431 190 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 LDOC1O95751 146 aaPredicted RBP18.69■□□□□ 0.58
USB1-213ENST00000566292 RFC1P35251 1148 aaPredicted RBP18.69■□□□□ 0.58
USB1-213ENST00000566292 RECQLP46063 649 aaPredicted RBP18.69■□□□□ 0.58
USB1-213ENST00000566292 NSFP46459 744 aaKnown RBP18.69■□□□□ 0.58
USB1-213ENST00000566292 UBXN1Q04323 297 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 OVGP1Q12889 678 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 DNAJC3Q13217 504 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 SMAD1Q15797 465 aaKnown RBP18.69■□□□□ 0.58
USB1-213ENST00000566292 STX1AQ16623 288 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 ZNF284Q2VY69 593 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 ARL13BQ3SXY8 428 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 SFMBT2Q5VUG0 894 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 DHRS13Q6UX07 377 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 HORMAD1Q86X24 394 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 PHF13Q86YI8 300 aaPredicted RBP18.69■□□□□ 0.58
USB1-213ENST00000566292 GALNT15Q8N3T1 639 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 OXR1Q8N573 874 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 PCDH20Q8N6Y1 951 aaKnown RBP18.69■□□□□ 0.58
USB1-213ENST00000566292 MDM1Q8TC05 714 aa18.69■□□□□ 0.58
USB1-213ENST00000566292 CNDP2Q96KP4 475 aaKnown RBP18.69■□□□□ 0.58
USB1-213ENST00000566292 PCMTD1Q96MG8 357 aaPredicted RBP18.69■□□□□ 0.58
USB1-213ENST00000566292 DYRK4Q9NR20 520 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms