RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 VPS35Q96QK1 796 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 PIF1Q9H611 641 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 KCNH4Q9UQ05 1017 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 TSPAN4O14817 238 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 ATMINO43313 823 aaPredicted RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 ACSL4O60488 711 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 TCEA3O75764 348 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 OR5F1O95221 314 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 NADKO95544 446 aaPredicted RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 HNF4AP41235 474 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 PIWIL4Q7Z3Z4 852 aaKnown RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 FBXO25Q8TCJ0 367 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 OXER1Q8TDS5 423 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 REXO5Q96IC2 774 aaKnown RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 TMEM121Q9BTD3 319 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 CAPN10Q9HC96 672 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 CHMP1AQ9HD42 196 aaPredicted RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 AAASQ9NRG9 546 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 ZNF214Q9UL59 606 aaPredicted RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 CLEC4AQ9UMR7 237 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 TRIM17Q9Y577 477 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 OVOS2A0A0G2JMS6 1433 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 CARNS1A5YM72 827 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 FOXN3O00409 490 aaPredicted RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 SLC30A4O14863 429 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 GRSF1Q12849 480 aaKnown RBP eCLIP5.15□□□□□ -1.58
SMG1-211ENST00000565324 SPIDRQ14159 915 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 KCNMB4Q86W47 210 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 SLITRK4Q8IW52 837 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 CCDC107Q8WV48 283 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 DBNDD1Q9H9R9 158 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 KIF28PB7ZC32 967 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 PSMD11O00231 422 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 RSL1D1O76021 490 aaKnown RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 ABHD2P08910 425 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 FGFR3P22607 806 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 RPL9P32969 192 aaKnown RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 RGS7P49802 495 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 MTAPQ13126 283 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 PPIL2Q13356 520 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 EMC2Q15006 297 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 FAM98CQ17RN3 349 aaKnown RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 RNF19BQ6ZMZ0 732 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 ATL1Q8WXF7 558 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 C11orf24Q96F05 449 aaPredicted RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 IL22Q9GZX6 179 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 MID1IP1Q9NPA3 183 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 FAM196BA6NMK8 535 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 ZNF37AP17032 561 aaPredicted RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 PAX3P23760 479 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 ATP5F1P24539 256 aaPredicted RBP5.15□□□□□ -1.58
SMG1-211ENST00000565324 MAPK9P45984 424 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 LHX1P48742 406 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 PRKG2Q13237 762 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 PDK4Q16654 411 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 CNSTQ6PJW8 725 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 PACS1Q6VY07 963 aa5.15□□□□□ -1.58
SMG1-211ENST00000565324 USP42Q9H9J4 1324 aaKnown RBP5.15□□□□□ -1.59
SMG1-211ENST00000565324 FAM172BPA6NC97 362 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 CSH1P0DML2 217 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 CSH2P0DML3 217 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 PEPDP12955 493 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 MSR1P21757 451 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 ACOT2P49753 483 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 RPL14P50914 215 aaKnown RBP5.15□□□□□ -1.59
SMG1-211ENST00000565324 CACNB2Q08289 660 aaPredicted RBP5.15□□□□□ -1.59
SMG1-211ENST00000565324 FAM189A2Q15884 450 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 ZNF621Q6ZSS3 439 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 SYT12Q8IV01 421 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 C12orf56Q8IXR9 622 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 NDNQ99608 321 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 APOL2Q9BQE5 337 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 IGSF1Q8N6C5 1336 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 SIN3BO75182 1162 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 TRMUO75648 421 aaKnown RBP5.15□□□□□ -1.59
SMG1-211ENST00000565324 PTX3P26022 381 aaPredicted RBP5.15□□□□□ -1.59
SMG1-211ENST00000565324 UGT2B15P54855 530 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 IL18Q14116 193 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 ERFEQ4G0M1 354 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 CIAPIN1Q6FI81 312 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 TTC7BQ86TV6 843 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 ARMC8Q8IUR7 673 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 WRNIP1Q96S55 665 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 KIAA1683Q9H0B3 1180 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 RAVER2Q9HCJ3 691 aaKnown RBP5.15□□□□□ -1.59
SMG1-211ENST00000565324 POLD4Q9HCU8 107 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 WRBO00258 174 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 TRIM38O00635 465 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 CHADO15335 359 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 RBMXL2O75526 392 aaKnown RBP5.15□□□□□ -1.59
SMG1-211ENST00000565324 PIK3CBP42338 1070 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 AMPD2Q01433 879 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 FOLH1Q04609 750 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 DALRD3Q5D0E6 543 aaKnown RBP5.15□□□□□ -1.59
SMG1-211ENST00000565324 XKRXQ6PP77 449 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 IQCF2Q8IXL9 164 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 FSTL5Q8N475 847 aaPredicted RBP5.15□□□□□ -1.59
SMG1-211ENST00000565324 SCAIQ8N9R8 606 aa5.15□□□□□ -1.59
SMG1-211ENST00000565324 DENND6BQ8NEG7 585 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms