RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 KBTBD13C9JR72 458 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TEX28O15482 410 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 LRCH4O75427 683 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 DDHD2O94830 711 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CYP2F1P24903 491 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 FDFT1P37268 417 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RPL10AP62906 217 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 FAM91A1Q658Y4 838 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RFWD3Q6PCD5 774 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RABEPKQ7Z6M1 372 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SLC4A11Q8NBS3 891 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 APPL2Q8NEU8 664 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RFFLQ8WZ73 363 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PPP1R10Q96QC0 940 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 FSD1LQ9BXM9 530 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 OSBPL6Q9BZF3 934 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 XYLT2Q9H1B5 865 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PARVAQ9NVD7 372 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SLC17A7Q9P2U7 560 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SSU72P8A0A1W2PR75 194 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 OR51F1A6NGY5 319 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TRIM24O15164 1050 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 EIF3HO15372 352 aaKnown RBP eCLIP3.41□□□□□ -1.862e-6■■■■■ 27
CHD9-213ENST00000564845 FAM189A1O60320 539 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RPS6KA5O75582 802 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 C22orf31O95567 290 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CHRNA1P02708 482 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 NCAM1P13591 858 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 GLDCP23378 1020 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 OLR1P78380 273 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ITKQ08881 620 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 DARS2Q6PI48 645 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 METTL7BQ6UX53 244 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TRMT11Q7Z4G4 463 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 ZNF410Q86VK4 478 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SRFBP1Q8NEF9 429 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 SLC7A14Q8TBB6 771 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ZBTB18Q99592 522 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 NRTNQ99748 197 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 OMDQ99983 421 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PIGUQ9H490 435 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 FBXO44Q9H4M3 255 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RIC8BQ9NVN3 520 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 NOP53Q9NZM5 478 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 RNF24Q9Y225 148 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 COL1A2P08123 1366 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CCDC162PA2VCL2 907 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 H7C0C1 242 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TIMM44O43615 452 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 GPR32O75388 356 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 DEAF1O75398 565 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 MAFO75444 373 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 MIPP30301 263 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CHRNA4P43681 627 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ATP5OP48047 213 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ACTR3P61158 418 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 THOC5Q13769 683 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 TRIM16LQ309B1 348 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ACAD10Q6JQN1 1059 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 OOSP2Q86WS3 158 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 KRT73Q86Y46 540 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 IQCKQ8N0W5 287 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 BLOC1S5Q8TDH9 187 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ASIC4Q96FT7 647 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 C17orf62Q9BQA9 187 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 CRISPLD1Q9H336 500 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 WDR55Q9H6Y2 383 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 PDLIM7Q9NR12 457 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RUVBL2Q9Y230 463 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 APOBEC2Q9Y235 224 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 TRIM17Q9Y577 477 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 KALRNO60229 2985 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 UBXN8O00124 270 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PSMD12O00232 456 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 ANGPT2O15123 496 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ALDH1A2O94788 518 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 KCNH1O95259 989 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 HSD17B7P56937 341 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CENPCQ03188 943 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 KLC1Q07866 573 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SLC44A4Q53GD3 710 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 STXBP5Q5T5C0 1151 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.41□□□□□ -1.861e-6■■■■■ 28.5
CHD9-213ENST00000564845 MON1BQ7L1V2 547 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SAPCD2Q86UD0 394 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SLC22A9Q8IVM8 553 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CHST13Q8NET6 341 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 AENQ8WTP8 325 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 RXFP2Q8WXD0 754 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 MRPL4Q9BYD3 311 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 PRKD2Q9BZL6 878 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 IARS2Q9NSE4 1012 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 LZTS1Q9Y250 596 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 MEI4A8MW99 385 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 M0QYT0 321 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 RGS16O15492 202 aaPredicted RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 PEX1O43933 1283 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 CCNT2O60583 730 aaKnown RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 PPP2R1BP30154 601 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms