RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 HESX1Q9UBX0 185 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 GLTPD2A6NH11 291 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 KCNU1A8MYU2 1149 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 PDHXO00330 501 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 BMP10O95393 424 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 CAPNS1P04632 268 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 TFE3P19532 575 aaPredicted RBP16.54■□□□□ 0.24
LINC00554-201ENST00000564841 DMPKQ09013 629 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 PTK2BQ14289 1009 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 METTL7BQ6UX53 244 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 GK5Q6ZS86 529 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.54■□□□□ 0.24
LINC00554-201ENST00000564841 SDCBP2Q9H190 292 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 TPK1Q9H3S4 243 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 PDLIM7Q9NR12 457 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 VPS45Q9NRW7 570 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 HMGXB4Q9UGU5 601 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 SLC8A2Q9UPR5 921 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 SLC27A5Q9Y2P5 690 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 NOX1Q9Y5S8 564 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 CCL15-CCL14A0A0B4J2E2 113 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 TMEM233B4DJY2 109 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 E7ENX8 843 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 B4GAT1O43505 415 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 PABPC1P11940 636 aaKnown RBP16.54■□□□□ 0.24
LINC00554-201ENST00000564841 TNK2Q07912 1038 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 SF3B4Q15427 424 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC00554-201ENST00000564841 TAZQ16635 292 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 CCL15Q16663 113 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 NHSL2Q5HYW2 709 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 FAM160B1Q5W0V3 765 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 NIPAL1Q6NVV3 410 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 SCYL2Q6P3W7 929 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 UBA3Q8TBC4 463 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 PCDH12Q9NPG4 1184 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 ZNF839A8K0R7 811 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 B4GALT5O43286 388 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 TCEA1P23193 301 aaKnown RBP16.53■□□□□ 0.24
LINC00554-201ENST00000564841 GRK2P25098 689 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 ACADVLP49748 655 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 GRM1Q13255 1194 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 KCNJ8Q15842 424 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 RGS21Q2M5E4 152 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 PGAM4Q8N0Y7 254 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 NIPA2Q8N8Q9 360 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 SCAIQ8N9R8 606 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 CMASQ8NFW8 434 aaPredicted RBP16.53■□□□□ 0.24
LINC00554-201ENST00000564841 STARD8Q92502 1023 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 LPGAT1Q92604 370 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 PIWIL1Q96J94 861 aaKnown RBP16.53■□□□□ 0.24
LINC00554-201ENST00000564841 SLC39A3Q9BRY0 314 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 PAK5Q9P286 719 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 FIS1Q9Y3D6 152 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 PCDHB12Q9Y5F1 795 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 C9IYK1 514 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 SOCS7O14512 581 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 AQP9O43315 295 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 TRUB2O95900 331 aaKnown RBP16.53■□□□□ 0.24
LINC00554-201ENST00000564841 SAPCD2Q86UD0 394 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 IGFN1Q86VF2 1251 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 PLD5Q8N7P1 536 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 ACVR1CQ8NER5 493 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 RPL10LQ96L21 214 aaKnown RBP16.53■□□□□ 0.24
LINC00554-201ENST00000564841 MPHOSPH6Q99547 160 aaKnown RBP16.53■□□□□ 0.24
LINC00554-201ENST00000564841 PCDHA11Q9Y5I1 949 aa16.53■□□□□ 0.24
LINC00554-201ENST00000564841 CFAP99D6REC4 459 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 ZNF286BP0CG31 522 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 ICAM3P32942 547 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 SOX11P35716 441 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 SNRPFP62306 86 aaKnown RBP16.52■□□□□ 0.24
LINC00554-201ENST00000564841 TRPC3Q13507 836 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 SPIDRQ14159 915 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 STILQ15468 1287 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 CADM3Q8N126 398 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 ACDQ96AP0 544 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 GATA5Q9BWX5 397 aaPredicted RBP16.52■□□□□ 0.24
LINC00554-201ENST00000564841 FRMD8Q9BZ67 464 aaPredicted RBP16.52■□□□□ 0.24
LINC00554-201ENST00000564841 MOCS1Q9NZB8 636 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 GIT1Q9Y2X7 761 aa16.52■□□□□ 0.24
LINC00554-201ENST00000564841 WDR81Q562E7 1941 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 TCAF2A6NFQ2 919 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 CNOT3O75175 753 aaKnown RBP16.52■□□□□ 0.23
LINC00554-201ENST00000564841 MATN1P21941 496 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 ZNF132P52740 706 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 TUBA4AP68366 448 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 PRKCQQ04759 706 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 TRIM16LQ309B1 348 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 TMEM126BQ8IUX1 230 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 CBR4Q8N4T8 237 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 DHRS1Q96LJ7 313 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 GPR20Q99678 358 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 NDEL1Q9GZM8 345 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 NACA2Q9H009 215 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 MTMR10Q9NXD2 777 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 TMA7Q9Y2S6 64 aaKnown RBP16.52■□□□□ 0.23
LINC00554-201ENST00000564841 CDY2AQ9Y6F7 541 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 CDY1Q9Y6F8 540 aa16.52■□□□□ 0.23
LINC00554-201ENST00000564841 A0A087WXM4 84 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 SLC25A27O95847 323 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 POLR2IP36954 125 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms