RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 RPS14P62263 151 aaKnown RBP16.28■□□□□ 0.2
RAB40C-208ENST00000564703 RAD51Q06609 339 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 IL10RBQ08334 325 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 CCDC15Q0P6D6 951 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 TFDP2Q14188 446 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 ELF2Q15723 593 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 CARD16Q5EG05 197 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 AFMIDQ63HM1 303 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 C22orf39Q6P5X5 142 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 KATNAL2Q8IYT4 538 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 BBS5Q8N3I7 341 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 UBL4BQ8N7F7 174 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 NKD2Q969F2 451 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-208ENST00000564703 RBM41Q96IZ5 413 aaKnown RBP16.28■□□□□ 0.2
RAB40C-208ENST00000564703 ZNF830Q96NB3 372 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-208ENST00000564703 FAM129BQ96TA1 746 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 OMDQ99983 421 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 TNKS2Q9H2K2 1166 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 LZTFL1Q9NQ48 299 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 CYP8B1Q9UNU6 501 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 PCDHA3Q9Y5H8 950 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 CKAP5Q14008 2032 aa16.28■□□□□ 0.2
RAB40C-208ENST00000564703 GRID2IPA4D2P6 1211 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 J3KR12 359 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 APOL1O14791 398 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 POP4O95707 220 aaKnown RBP16.27■□□□□ 0.2
RAB40C-208ENST00000564703 ADH1BP00325 375 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 PRNPP04156 253 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 C5AR1P21730 350 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 CHRNA3P32297 505 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 RWDD2BP57060 319 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 RHOAP61586 193 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 SRSF5Q13243 272 aaKnown RBP16.27■□□□□ 0.2
RAB40C-208ENST00000564703 RFTN1Q14699 578 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-208ENST00000564703 PAFAH1B3Q15102 231 aaKnown RBP16.27■□□□□ 0.2
RAB40C-208ENST00000564703 CST6Q15828 149 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 BZW1Q7L1Q6 419 aaKnown RBP16.27■□□□□ 0.2
RAB40C-208ENST00000564703 CACUL1Q86Y37 369 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 ARHGAP12Q8IWW6 846 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 PLPP6Q8IY26 295 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 ATPAF2Q8N5M1 289 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 NPWQ8N729 165 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 NETO2Q8NC67 525 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 OR2A12Q8NGT7 310 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 EXD1Q8NHP7 514 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 FAF2Q96CS3 445 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 PDLIM2Q96JY6 352 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 HEPHQ9BQS7 1158 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 HECAQ9UBI9 543 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-208ENST00000564703 PPP2R2CQ9Y2T4 447 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 ACTL7AQ9Y615 435 aa16.27■□□□□ 0.2
RAB40C-208ENST00000564703 CHD5Q8TDI0 1954 aa16.27■□□□□ 0.19
RAB40C-208ENST00000564703 MUC6Q6W4X9 2439 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 A0A0U1RQJ8 604 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 MIF4GDA9UHW6 222 aaKnown RBP16.26■□□□□ 0.19
RAB40C-208ENST00000564703 NEBLO76041 1014 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 TMCC1O94876 653 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 CD160O95971 181 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 LMNAP02545 664 aaKnown RBP16.26■□□□□ 0.19
RAB40C-208ENST00000564703 CTNNA2P26232 953 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 CTNNA1P35221 906 aaKnown RBP16.26■□□□□ 0.19
RAB40C-208ENST00000564703 PSMD8P48556 350 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 TPMTP51580 245 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 RENBPP51606 427 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 COPS2P61201 443 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 MAP7D1Q3KQU3 841 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 TFDP3Q5H9I0 405 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 TMCO4Q5TGY1 634 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 KAZNQ674X7 775 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 NCBP2-AS2Q69YL0 99 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 MFSD7Q6UXD7 560 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 SPOCD1Q6ZMY3 1216 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 DPY19L3Q6ZPD9 716 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 ZNF662Q6ZS27 426 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 LPCAT2Q7L5N7 544 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 NT5DC3Q86UY8 548 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 KBTBD6Q86V97 674 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 LRRC57Q8N9N7 239 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 CCNYQ8ND76 341 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 TMIEQ8NEW7 156 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 OR2AP1Q8NGE2 309 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 ZNF599Q96NL3 588 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 ALS2CR12Q96Q35 445 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 CINPQ9BW66 212 aaPredicted RBP16.26■□□□□ 0.19
RAB40C-208ENST00000564703 TM6SF2Q9BZW4 377 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 EPC1Q9H2F5 836 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 DYRK4Q9NR20 520 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 FBXL12Q9NXK8 326 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 IL36AQ9UHA7 158 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 MFHAS1Q9Y4C4 1052 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 HEY1Q9Y5J3 304 aa16.26■□□□□ 0.19
RAB40C-208ENST00000564703 C3orf70A6NLC5 250 aaPredicted RBP16.25■□□□□ 0.19
RAB40C-208ENST00000564703 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 RNASEH2AO75792 299 aaKnown RBP16.25■□□□□ 0.19
RAB40C-208ENST00000564703 IGSF6O95976 241 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 GSRP00390 522 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 CD6P30203 668 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 CDKN2BP42772 138 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 RPL6Q02878 288 aaKnown RBP16.25■□□□□ 0.19
RAB40C-208ENST00000564703 CCDC173Q0VFZ6 552 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms