RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 ZNF567Q8N184 647 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 C4orf33Q8N1A6 199 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SCAMP5Q8TAC9 235 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GSDMBQ8TAX9 411 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ITFG1Q8TB96 612 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SLC44A1Q8WWI5 657 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TBC1D31Q96DN5 1066 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TCEAL4Q96EI5 215 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GCNAQ96QF7 691 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 HAPLN3Q96S86 360 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MYADMQ96S97 322 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 VAT1Q99536 393 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 EBNA1BP2Q99848 306 aaKnown RBP7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 NAT9Q9BTE0 207 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CATSPERBQ9H7T0 1116 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ZNF334Q9HCZ1 680 aaPredicted RBP7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MLXIPLQ9NP71 852 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ARHGEF38Q9NXL2 777 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 IGSF9Q9P2J2 1179 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 HSFX1Q9UBD0 423 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ZNF180Q9UJW8 692 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TRHDEQ9UKU6 1024 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SCML2Q9UQR0 700 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ASB3Q9Y575 518 aa7.59□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TECTAO75443 2155 aa7.59□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MIA3Q5JRA6 1907 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 OBSL1O75147 1896 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NYNRINQ9P2P1 1898 aaKnown RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TPRP12270 2363 aaKnown RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 A0A1W2PQH9 124 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 A0A1W2PRU2 124 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SDR42E2A6NKP2 422 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TCP11X1B4DZS4 312 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 F5H423 210 aaPredicted RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 I6L893 689 aaPredicted RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZNF197O14709 1029 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TNFRSF10BO14763 440 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TM9SF1O15321 606 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PSMD3O43242 534 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KRT38O76015 456 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RTN3O95197 1032 aaPredicted RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 POU2F2P09086 479 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PYGBP11216 843 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ALADP13716 330 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PGAM1P18669 254 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PRKCHP24723 683 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PTPN3P26045 913 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GABRR2P28476 465 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 HOXC13P31276 330 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CCR1P32246 355 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GARSP41250 739 aaKnown RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CCR2P41597 374 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SERPINB9P50453 376 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CYP4F8P98187 520 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZP2Q05996 745 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZNF33AQ06730 810 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 WASHC5Q12768 1159 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MPP2Q14168 576 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TEAD2Q15562 447 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZKSCAN8Q15776 578 aaPredicted RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SLC5A9Q2M3M2 681 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RNF187Q5TA31 235 aaPredicted RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TTC39BQ5VTQ0 682 aaPredicted RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 STEAP4Q687X5 459 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RWDD4Q6NW29 188 aaKnown RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CASC4Q6P4E1 433 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 OTOP3Q7RTS5 596 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PID1Q7Z2X4 250 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SCD5Q86SK9 330 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MON1AQ86VX9 555 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LRRC6Q86X45 466 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NUP93Q8N1F7 819 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 AGGF1Q8N302 714 aaeCLIP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ATPAF2Q8N5M1 289 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 OTUD6BQ8N6M0 293 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NPWQ8N729 165 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PPM1NQ8N819 430 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PDCD7Q8N8D1 485 aaKnown RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ST13P5Q8NFI4 369 aaPredicted RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 DEPDC1BQ8WUY9 529 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CDKL2Q92772 493 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PSMG2Q969U7 264 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 APOPT1Q96IL0 206 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SIGLEC10Q96LC7 697 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PPP1R2P1Q96PQ5 205 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PAIP2Q9BPZ3 127 aaKnown RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PLCD4Q9BRC7 762 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CEP41Q9BYV8 373 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 IQCGQ9H095 443 aaKnown RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GBA3Q9H227 469 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KCNH6Q9H252 994 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ATXN3LQ9H3M9 355 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KIF9Q9HAQ2 790 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ANLNQ9NQW6 1124 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 OLA1Q9NTK5 396 aaKnown RBP7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FGFR1OP2Q9NVK5 253 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PRKAG3Q9UGI9 489 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SNX10Q9Y5X0 201 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ANAPC1Q9H1A4 1944 aa7.58□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ASPMQ8IZT6 3477 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms