RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 SNRNP25Q9BV90 132 aaKnown RBP20.27■□□□□ 0.84
CMTM3-207ENST00000564060 GTPBP2Q9BX10 602 aaKnown RBP20.27■□□□□ 0.84
CMTM3-207ENST00000564060 MAGEB5Q9BZ81 275 aa20.27■□□□□ 0.84
CMTM3-207ENST00000564060 DEF6Q9H4E7 631 aa20.27■□□□□ 0.84
CMTM3-207ENST00000564060 DHX35Q9H5Z1 703 aaKnown RBP20.27■□□□□ 0.84
CMTM3-207ENST00000564060 DYRK4Q9NR20 520 aa20.27■□□□□ 0.84
CMTM3-207ENST00000564060 PCSK1NQ9UHG2 260 aa20.27■□□□□ 0.84
CMTM3-207ENST00000564060 LAMA1P25391 3075 aa20.27■□□□□ 0.84
CMTM3-207ENST00000564060 ASCC3Q8N3C0 2202 aaKnown RBP20.26■□□□□ 0.83
CMTM3-207ENST00000564060 K7ERQ8 282 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 EEF2KO00418 725 aaKnown RBP20.26■□□□□ 0.83
CMTM3-207ENST00000564060 TM4SF5O14894 197 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 SMAD6O43541 496 aaKnown RBP20.26■□□□□ 0.83
CMTM3-207ENST00000564060 LRCH4O75427 683 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 DRD3P35462 400 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 ACVRL1P37023 503 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 AFF3P51826 1226 aaKnown RBP20.26■□□□□ 0.83
CMTM3-207ENST00000564060 NCEH1Q6PIU2 408 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 IL27RAQ6UWB1 636 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-207ENST00000564060 THAP2Q9H0W7 228 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 IL36AQ9UHA7 158 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 IP6K2Q9UHH9 426 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 SARDHQ9UL12 918 aa20.26■□□□□ 0.83
CMTM3-207ENST00000564060 TMEM131Q92545 1883 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 SSU72P8A0A1W2PR75 194 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 KPNA3O00505 521 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-207ENST00000564060 DAPK3O43293 454 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 KDELR3O43731 214 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 OPHN1O60890 802 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 NUDT1P36639 197 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 CCR5P51681 352 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 SLC18A3Q16572 532 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 UAP1L1Q3KQV9 507 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 SARM1Q6SZW1 724 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 CNGA4Q8IV77 575 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 PLPP6Q8IY26 295 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 UMODL1-AS1Q8N2C9 162 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 MINDY1Q8N5J2 469 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 NUP85Q9BW27 656 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 TRIM7Q9C029 511 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 TNKS2Q9H2K2 1166 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 ABHD10Q9NUJ1 306 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 LCMT1Q9UIC8 334 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 ANAPC7Q9UJX3 599 aa20.25■□□□□ 0.83
CMTM3-207ENST00000564060 DNAH14Q0VDD8 3507 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3DA0A087WVF3 549 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3IA0A087WXS9 549 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3EA0A087X179 549 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3KA0A087X1G2 549 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 A0A1W2PPC4 97 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3FA6NER0 549 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3LB9A6J9 549 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 PLRG1O43660 514 aaKnown RBP20.24■□□□□ 0.83
CMTM3-207ENST00000564060 MFAP3LO75121 409 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 CER1O95813 267 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 CYP1A2P05177 515 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 IGHV4-34P06331 123 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3HP0C7X1 549 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 EIF4A3P38919 411 aaKnown RBP20.24■□□□□ 0.83
CMTM3-207ENST00000564060 GRIA4P48058 902 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 NDST2P52849 883 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 SNRPD1P62314 119 aaKnown RBP20.24■□□□□ 0.83
CMTM3-207ENST00000564060 GRIK2Q13002 908 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-207ENST00000564060 BOLA3Q53S33 107 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 CARD16Q5EG05 197 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 PPM1JQ5JR12 505 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3GQ6DHY5 549 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3CQ6IPX1 549 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 DPY19L3Q6ZPD9 716 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 TBC1D3Q8IZP1 549 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-207ENST00000564060 ARFGAP1Q8N6T3 406 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 NIPA2Q8N8Q9 360 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 C1orf216Q8TAB5 229 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 CTNNBL1Q8WYA6 563 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-207ENST00000564060 SKA1Q96BD8 255 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 LRIG1Q96JA1 1093 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 PEBP4Q96S96 227 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 HEPHQ9BQS7 1158 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 ZWILCHQ9H900 591 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 GPATCH2LQ9NWQ4 482 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 CACNA1AO00555 2505 aa20.24■□□□□ 0.83
CMTM3-207ENST00000564060 RASA4BC9J798 803 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 MYO1FO00160 1098 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 RASA4O43374 803 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 BUB1O43683 1085 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 AKR1B10O60218 316 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 GSRP00390 522 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 DNA2P51530 1060 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 CCNHP51946 323 aaPredicted RBP20.23■□□□□ 0.83
CMTM3-207ENST00000564060 RACK1P63244 317 aaKnown RBP20.23■□□□□ 0.83
CMTM3-207ENST00000564060 CNTN1Q12860 1018 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 INO80DQ53TQ3 878 aaPredicted RBP20.23■□□□□ 0.83
CMTM3-207ENST00000564060 PPP6R3Q5H9R7 873 aaPredicted RBP20.23■□□□□ 0.83
CMTM3-207ENST00000564060 AGBL4Q5VU57 503 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 ADAT2Q7Z6V5 191 aaKnown RBP20.23■□□□□ 0.83
CMTM3-207ENST00000564060 GRIN3AQ8TCU5 1115 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 TRIM5Q9C035 493 aa20.23■□□□□ 0.83
CMTM3-207ENST00000564060 PREBQ9HCU5 417 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms