RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 NEU2Q9Y3R4 380 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 FRYLO94915 3013 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 ZNF292O60281 2723 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 DOCK4Q8N1I0 1966 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.16□□□□□ -0.3
SPG7-209ENST00000564047 TTI1O43156 1089 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 GCATO75600 419 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 ZMPSTE24O75844 475 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 KRT14P02533 472 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 CCNB1P14635 433 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 ID4P47928 161 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 WASHC5Q12768 1159 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 PTK6Q13882 451 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 HNRNPDQ14103 355 aaKnown RBP13.16□□□□□ -0.3
SPG7-209ENST00000564047 RFTN1Q14699 578 aaPredicted RBP13.16□□□□□ -0.3
SPG7-209ENST00000564047 PPP1R7Q15435 360 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 PREPLQ4J6C6 727 aaPredicted RBP13.16□□□□□ -0.3
SPG7-209ENST00000564047 GRAMD4Q6IC98 578 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 ASCL5Q7RTU5 278 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 C12orf40Q86WS4 652 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 AHI1Q8N157 1196 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 CCDC89Q8N998 374 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 CCHCR1Q8TD31 782 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 WFIKKN2Q8TEU8 576 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 IL12RB2Q99665 862 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 DEC1Q9P2X7 70 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 TRHDEQ9UKU6 1024 aa13.16□□□□□ -0.3
SPG7-209ENST00000564047 A0A0A0MRY4 1105 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 PRR23AA6NEV1 266 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 KCNK1O00180 336 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 RNF103O00237 685 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 CBX4O00257 560 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 OPHN1O60890 802 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 IFNB1P01574 187 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 PTPN3P26045 913 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 ACTN2P35609 894 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 OPRD1P41143 372 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 SLC6A11P48066 632 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 RENBPP51606 427 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 GEMIN4P57678 1058 aaKnown RBP13.15□□□□□ -0.3
SPG7-209ENST00000564047 ARF5P84085 180 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 SULT2A1Q06520 285 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 SLC20A2Q08357 652 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 ZBTB17Q13105 803 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 TDGQ13569 410 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 FUT11Q495W5 492 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 TEX44Q53QW1 395 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 INO80DQ53TQ3 878 aaPredicted RBP13.15□□□□□ -0.3
SPG7-209ENST00000564047 TMCO4Q5TGY1 634 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 MARC1Q5VT66 337 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 RETSATQ6NUM9 610 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 C4orf22Q6V702 233 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 ADIPOR2Q86V24 386 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 TEX26Q8N6G2 289 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 TTC8Q8TAM2 541 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 CASKIN2Q8WXE0 1202 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 TTC17Q96AE7 1141 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 SPATA13Q96N96 652 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 RAB17Q9H0T7 212 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 SEPT10Q9P0V9 454 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 PAK5Q9P286 719 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 UBA2Q9UBT2 640 aaPredicted RBP13.15□□□□□ -0.3
SPG7-209ENST00000564047 VPS51Q9UID3 782 aa13.15□□□□□ -0.3
SPG7-209ENST00000564047 TRIM24O15164 1050 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
SPG7-209ENST00000564047 SNAP91O60641 907 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 JCHAINP01591 159 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 ASLP04424 464 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 ASGR2P07307 311 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 ZSCAN5DPP0CG00 497 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 POLR2EP19388 210 aaKnown RBP13.14□□□□□ -0.31
SPG7-209ENST00000564047 GLDCP23378 1020 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 RPL22P35268 128 aaKnown RBP13.14□□□□□ -0.31
SPG7-209ENST00000564047 MRPS25P82663 173 aaKnown RBP13.14□□□□□ -0.31
SPG7-209ENST00000564047 PFKPQ01813 784 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 SLC10A7Q0GE19 358 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 LBRQ14739 615 aaKnown RBP13.14□□□□□ -0.31
SPG7-209ENST00000564047 EIF4HQ15056 248 aaKnown RBP13.14□□□□□ -0.31
SPG7-209ENST00000564047 GEN1Q17RS7 908 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 ANKRD20A2Q5SQ80 823 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 ANKRD20A1Q5TYW2 823 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 ANKRD20A3Q5VUR7 823 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 MBLAC2Q68D91 279 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 PID1Q7Z2X4 250 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 METTL3Q86U44 580 aaKnown RBP13.14□□□□□ -0.31
SPG7-209ENST00000564047 ZNF567Q8N184 647 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 BBS5Q8N3I7 341 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 PHTF2Q8N3S3 785 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 GLIS1Q8NBF1 620 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 CHFRQ96EP1 664 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 TEKT5Q96M29 485 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 PNKPQ96T60 521 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 ERP44Q9BS26 406 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 TRIM51Q9BSJ1 452 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 EPC1Q9H2F5 836 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 C8orf33Q9H7E9 229 aaPredicted RBP13.14□□□□□ -0.31
SPG7-209ENST00000564047 SLC2A4RGQ9NR83 387 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 HAUS2Q9NVX0 235 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 RBM22Q9NW64 420 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■□□□□ 9.2
SPG7-209ENST00000564047 KLHL8Q9P2G9 620 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms