RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 PATE3B3GLJ2 98 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 DAPK3O43293 454 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 BNIP3LO60238 219 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 RNASEH2AO75792 299 aaKnown RBP20.68■□□□□ 0.9
CMTM3-206ENST00000563672 MTA2O94776 668 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 LCA5LO95447 670 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 SEMA4FO95754 770 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 CTSLP07711 333 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 FECHP22830 423 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 CHRNA3P32297 505 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 METAP1P53582 386 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 WDR45BQ5MNZ6 344 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 AFMIDQ63HM1 303 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 DPY19L3Q6ZPD9 716 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 POLNQ7Z5Q5 900 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 CPNE8Q86YQ8 564 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 C12orf50Q8NA57 414 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-206ENST00000563672 CHST14Q8NCH0 376 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 TMIEQ8NEW7 156 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 PIP4K2CQ8TBX8 421 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 C6orf106Q9H6K1 298 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-206ENST00000563672 RXFP3Q9NSD7 469 aa20.68■□□□□ 0.9
CMTM3-206ENST00000563672 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.68■□□□□ 0.9
CMTM3-206ENST00000563672 C10orf142B7Z368 130 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 H3BRJ5 948 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 KHNYNO15037 678 aaKnown RBP20.67■□□□□ 0.9
CMTM3-206ENST00000563672 BUB1O43683 1085 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 GDF9O60383 454 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 NUMA1Q14980 2115 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 TCEAL1Q15170 157 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 HADHQ16836 314 aaKnown RBP20.67■□□□□ 0.9
CMTM3-206ENST00000563672 CARD16Q5EG05 197 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 DCAF12L1Q5VU92 463 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 SLC23A3Q6PIS1 610 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 LEKR1Q6ZMV7 388 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 RHOT2Q8IXI1 618 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 CCDC170Q8IYT3 715 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 FAM71BQ8TC56 605 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 TSC1Q92574 1164 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 SLC39A8Q9C0K1 460 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 PCDH18Q9HCL0 1135 aa20.67■□□□□ 0.9
CMTM3-206ENST00000563672 ATXN2Q99700 1313 aaKnown RBP20.67■□□□□ 0.9
CMTM3-206ENST00000563672 TNRC6BQ9UPQ9 1833 aaKnown RBP20.67■□□□□ 0.9
CMTM3-206ENST00000563672 C1QTNF3-AMACRE9PGA6 284 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 MAOBP27338 520 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 MAN1A1P33908 653 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 ARL4AP40617 200 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 RECQLP46063 649 aaPredicted RBP20.66■□□□□ 0.9
CMTM3-206ENST00000563672 IRX4P78413 519 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 DUOXA1Q1HG43 343 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 INO80DQ53TQ3 878 aaPredicted RBP20.66■□□□□ 0.9
CMTM3-206ENST00000563672 TRIM61Q5EBN2 209 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 ZNF354CQ86Y25 554 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 ARHGAP12Q8IWW6 846 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 RGL4Q8IZJ4 473 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 NPWQ8N729 165 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 CEP76Q8TAP6 659 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 CASKIN2Q8WXE0 1202 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 RFFLQ8WZ73 363 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 CELF6Q96J87 481 aaKnown RBP20.66■□□□□ 0.9
CMTM3-206ENST00000563672 CSPG4P5Q96PW8 444 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.66■□□□□ 0.9
CMTM3-206ENST00000563672 WASF2Q9Y6W5 498 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 RALGAPA1Q6GYQ0 2036 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 NUP205Q92621 2012 aa20.66■□□□□ 0.9
CMTM3-206ENST00000563672 LNP1A1A4G5 178 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 MEI4A8MW99 385 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 RNF103O00237 685 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 SLC7A4O43246 635 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 PRNPP04156 253 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 AMPD1P23109 780 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 IL4RP24394 825 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 CDC25BP30305 580 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 ARHGAP25P42331 645 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 SSR1P43307 286 aaKnown RBP20.65■□□□□ 0.9
CMTM3-206ENST00000563672 PAPOLAP51003 745 aaKnown RBP20.65■□□□□ 0.9
CMTM3-206ENST00000563672 ARSEP51690 589 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 TAS2R40P59535 323 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 AASDHQ4L235 1098 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-206ENST00000563672 ATP13A4Q4VNC1 1196 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 ARSIQ5FYB1 569 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-206ENST00000563672 RABEPKQ7Z6M1 372 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 LZTR1Q8N653 840 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 OR2T34Q8NGX1 318 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 C1orf216Q8TAB5 229 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 VOPP1Q96AW1 172 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 BIRC7Q96CA5 298 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 RMDN1Q96DB5 314 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 HEPHQ9BQS7 1158 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 PDFQ9HBH1 243 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 SUSD2Q9UGT4 822 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 IL36AQ9UHA7 158 aa20.65■□□□□ 0.9
CMTM3-206ENST00000563672 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-206ENST00000563672 ARHGAP42A6NI28 874 aa20.64■□□□□ 0.89
CMTM3-206ENST00000563672 LRRC72A6NJI9 287 aa20.64■□□□□ 0.89
CMTM3-206ENST00000563672 PLK4O00444 970 aa20.64■□□□□ 0.89
CMTM3-206ENST00000563672 PRAMEF11O60813 436 aa20.64■□□□□ 0.89
CMTM3-206ENST00000563672 TMCC1O94876 653 aa20.64■□□□□ 0.89
CMTM3-206ENST00000563672 GSRP00390 522 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms