RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 DNASE2BQ8WZ79 361 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 IFT27Q9BW83 186 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 CADM1Q9BY67 442 aaKnown RBP3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 NDUFAF4Q9P032 175 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 MDFICQ9P1T7 246 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 LRFN1Q9P244 771 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 SEL1LQ9UBV2 794 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 KCND3Q9UK17 655 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 BAG5Q9UL15 447 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 OSGIN2Q9Y236 505 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 LRCH1Q9Y2L9 728 aa3.56□□□□□ -1.84
HMGB1P33-201ENST00000563485 A0A1B0GUV1 79 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 TMEM247A6NEH6 219 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 FAM90A20PA6NIJ5 464 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 SMTNL1A8MU46 457 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 ASAP2O43150 1006 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 SOX30O94993 753 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 SETSIPP0DME0 302 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 CYP4B1P13584 511 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 ACP5P13686 325 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 CHN1P15882 459 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 NAGAP17050 411 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 AMTP48728 403 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 ERVFC1-1P60608 527 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 SEC61A1P61619 476 aaKnown RBP3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 COASYQ13057 564 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 C9orf50Q5SZB4 431 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 ATG9BQ674R7 924 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 GALNT7Q86SF2 657 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 SERPINA11Q86U17 422 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 WDR5BQ86VZ2 330 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 PALB2Q86YC2 1186 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 BRSK2Q8IWQ3 736 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 PTGR2Q8N8N7 351 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 STT3BQ8TCJ2 826 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 WFIKKN2Q8TEU8 576 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 TRAPPC9Q96Q05 1148 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 GFM1Q96RP9 751 aaKnown RBP3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 RMDN3Q96TC7 470 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 CRB3Q9BUF7 120 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 ZNF556Q9HAH1 456 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 DACT1Q9NYF0 836 aa3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 SRPRBQ9Y5M8 271 aaKnown RBP3.55□□□□□ -1.84
HMGB1P33-201ENST00000563485 C17orf102A2RUQ5 167 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 C17orf100A8MU93 164 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 RNMTO43148 476 aaKnown RBP3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 CCNT1O60563 726 aaKnown RBP3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 ZNF432O94892 652 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 IGKV3-20P01619 116 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 ENO3P13929 434 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 ARSAP15289 507 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 RFC1P35251 1148 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 BNC1Q01954 994 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 TBC1D9BQ66K14 1250 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 AADACL2Q6P093 401 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 SPSB3Q6PJ21 355 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 TOGARAM2Q6ZUX3 1019 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 H1FNTQ75WM6 255 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 RASGRP2Q7LDG7 609 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 ZDHHC23Q8IYP9 409 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 SCAIQ8N9R8 606 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 TMEM163Q8TC26 289 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 FAM216AQ8WUB2 273 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 RTP4Q96DX8 246 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 FIZ1Q96SL8 496 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 HERC2P3Q9BVR0 1158 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 LHPPQ9H008 270 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 IL36RNQ9UBH0 155 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 ICAM5Q9UMF0 924 aa3.54□□□□□ -1.84
HMGB1P33-201ENST00000563485 IGHV4-28A0A0C4DH34 117 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 ABHD14A-ACY1A0A1B0GW23 586 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 PLSCR5A0PG75 271 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 TARSL2A2RTX5 802 aaKnown RBP3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 LINC01553A4QN01 128 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 SRRM3A6NNA2 597 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 H0Y3Z8 333 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 KCNJ13O60928 360 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 DDNO94850 711 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 CAMTA2O94983 1202 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 DPP6P42658 865 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 RPS6KA3P51812 740 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 ICA1Q05084 483 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 EEF1A2Q05639 463 aaKnown RBP3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 GRSF1Q12849 480 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 TRAF2Q12933 501 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 MYBPC2Q14324 1141 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 HLFQ16534 295 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 FAM76BQ5HYJ3 339 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 SYCP2LQ5T4T6 812 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 TMEM268Q5VZI3 342 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 MON1BQ7L1V2 547 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 SYT13Q7L8C5 426 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 ZNF329Q86UD4 541 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 TEX45Q8NA69 505 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 TMEM18Q96B42 140 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 TEFMQ96QE5 360 aaKnown RBP3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 DDX23Q9BUQ8 820 aaKnown RBP3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 C1QTNF4Q9BXJ3 329 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 PLEKHA2Q9HB19 425 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 TMLHEQ9NVH6 421 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms