RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 LBRQ14739 615 aaKnown RBP18.36■□□□□ 0.53
COMMD4-208ENST00000563220 FSCBQ5H9T9 825 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 TTC39BQ5VTQ0 682 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-208ENST00000563220 IL31Q6EBC2 164 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 CASC4Q6P4E1 433 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 POTEHQ6S545 545 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 GRASPQ7Z6J2 395 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-208ENST00000563220 EXOC3L1Q86VI1 746 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 CMTM8Q8IZV2 173 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 DNAAF3Q8N9W5 541 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 NSMCE1Q8WV22 266 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 DHRS4Q9BTZ2 278 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 SLC25A51Q9H1U9 297 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 TASP1Q9H6P5 420 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 LAMA3Q16787 3333 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 TTC24A2A3L6 582 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 GEMP55040 296 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 ZSCAN26Q16670 478 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 KLHL38Q2WGJ6 581 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 KBTBD12Q3ZCT8 623 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 PRSS36Q5K4E3 855 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 CERCAMQ5T4B2 595 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 RNF219Q5W0B1 726 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 CARNMT1Q8N4J0 409 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 IPMKQ8NFU5 416 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 RIN3Q8TB24 985 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 SH3RF2Q8TEC5 729 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 CYTH2Q99418 400 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 GDF15Q99988 308 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 ACE2Q9BYF1 805 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 ZDHHC7Q9NXF8 308 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 FETUBQ9UGM5 382 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 SLC24A2Q9UI40 661 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 ZNF510Q9Y2H8 683 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 CEP290O15078 2479 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 EPOPA6NHQ4 379 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 MUSKO15146 869 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 KDELR3O43731 214 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 PMPCBO75439 489 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 GSTA2P09210 222 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 TPH1P17752 444 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 ADRA1AP35348 466 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 PPP2R2AP63151 447 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 SKOR1P84550 965 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 ITKQ08881 620 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 TMCO4Q5TGY1 634 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 STEAP4Q687X5 459 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 NAPEPLDQ6IQ20 393 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 TRMT10BQ6PF06 316 aaKnown RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 RIBC1Q8N443 379 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 HJURPQ8NCD3 748 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 GSDMBQ8TAX9 411 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 BHMTQ93088 406 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 IMP4Q96G21 291 aaKnown RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 MRGPRX2Q96LB1 330 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 PAFAH2Q99487 392 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 TBL1YQ9BQ87 522 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 STMN4Q9H169 189 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-208ENST00000563220 TLE6Q9H808 572 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 SMYD2Q9NRG4 433 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 BFARQ9NZS9 450 aa18.35■□□□□ 0.53
COMMD4-208ENST00000563220 GBF1Q92538 1859 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 CXorf49A8MYA2 514 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-208ENST00000563220 H0Y626 953 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 MMP2P08253 660 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 CREB1P16220 341 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 PRKCHP24723 683 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 DDX6P26196 483 aaKnown RBP eCLIP18.34■□□□□ 0.53
COMMD4-208ENST00000563220 STX2P32856 288 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 AVPR1AP37288 418 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 OXCT1P55809 520 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 DSC2Q02487 901 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 RASA2Q15283 850 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 TMED2Q15363 201 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 DENND5AQ6IQ26 1287 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 KDELC1Q6UW63 502 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 CPXM2Q8N436 756 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 C12orf76Q8N812 135 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-208ENST00000563220 ARRDC2Q8TBH0 407 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 WFDC5Q8TCV5 224 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 GDPD5Q8WTR4 605 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 USP13Q92995 863 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-208ENST00000563220 ZNF599Q96NL3 588 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 FICDQ9BVA6 458 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 PPCSQ9HAB8 311 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 ATP13A1Q9HD20 1204 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 DENND4CQ5VZ89 1909 aa18.34■□□□□ 0.53
COMMD4-208ENST00000563220 LUC7L3O95232 432 aaKnown RBP18.33■□□□□ 0.53
COMMD4-208ENST00000563220 MZF1P28698 734 aaPredicted RBP18.33■□□□□ 0.53
COMMD4-208ENST00000563220 NRIP1P48552 1158 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 NPY2RP49146 381 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 CDH17Q12864 832 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 ARHGAP15Q53QZ3 475 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 PPP2R2DQ66LE6 453 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 ADGRD1Q6QNK2 874 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 CES3Q6UWW8 571 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 LINC00523Q86TU6 105 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 UNC5BQ8IZJ1 945 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms