RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CPSF2Q9P2I0 782 aaKnown RBP13.3□□□□□ -0.28
USB1-207ENST00000563149 SLC39A10Q9ULF5 831 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 RAB26Q9ULW5 256 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 RUVBL2Q9Y230 463 aaKnown RBP13.3□□□□□ -0.28
USB1-207ENST00000563149 CDYLQ9Y232 598 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 PTCH2Q9Y6C5 1203 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 COMMD3-BMI1R4GMX3 469 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 TARM1B6A8C7 271 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 AIM2O14862 343 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 NPHS1O60500 1241 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 ZMPSTE24O75844 475 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 F2P00734 622 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 MPSTP25325 297 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 NMBRP28336 390 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 GSTT1P30711 240 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 CYP2C18P33260 490 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 CXCR3P49682 368 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 NUDT2P50583 147 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 KPNA2P52292 529 aaKnown RBP13.3□□□□□ -0.28
USB1-207ENST00000563149 USP10Q14694 798 aaKnown RBP13.3□□□□□ -0.28
USB1-207ENST00000563149 LRRC36Q1X8D7 754 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 ZNF423Q2M1K9 1284 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 PIGGQ5H8A4 983 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 ARMC3Q5W041 872 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 PM20D1Q6GTS8 502 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 DCLRE1AQ6PJP8 1040 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 TMC7Q7Z402 723 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 SNX32Q86XE0 403 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 NPWQ8N729 165 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 ADCY4Q8NFM4 1077 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 PTCD2Q8WV60 388 aaKnown RBP13.3□□□□□ -0.28
USB1-207ENST00000563149 IRGQQ8WZA9 623 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 COLEC11Q9BWP8 271 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 WDCPQ9H6R7 721 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 EFCAB1Q9HAE3 211 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 GOLGA2P5Q9HBQ8 144 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 MRM3Q9HC36 420 aaKnown RBP13.3□□□□□ -0.28
USB1-207ENST00000563149 IPPQ9Y573 584 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 ZNF638Q14966 1978 aaKnown RBP13.29□□□□□ -0.28
USB1-207ENST00000563149 YJEFN3A6XGL0 299 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 CHRNGP07510 517 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 SBK3P0C264 359 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 NCAM1P13591 858 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
USB1-207ENST00000563149 CCNCP24863 283 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 GTF2A2P52657 109 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 FOLH1Q04609 750 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 NSUN2Q08J23 767 aaKnown RBP eCLIP13.29□□□□□ -0.28
USB1-207ENST00000563149 IRF5Q13568 498 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 PEX6Q13608 980 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 SMAD1Q15797 465 aaKnown RBP13.29□□□□□ -0.28
USB1-207ENST00000563149 GRAMD1BQ3KR37 738 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 ARL13AQ5H913 290 aaPredicted RBP13.29□□□□□ -0.28
USB1-207ENST00000563149 RARS2Q5T160 578 aaKnown RBP13.29□□□□□ -0.28
USB1-207ENST00000563149 WSCD1Q658N2 575 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 LRRC8EQ6NSJ5 796 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 PKN3Q6P5Z2 889 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 UGT2A3Q6UWM9 527 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 DPP9Q86TI2 863 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 HIPK4Q8NE63 616 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 ZSCAN18Q8TBC5 510 aaPredicted RBP13.29□□□□□ -0.28
USB1-207ENST00000563149 MAML3Q96JK9 1138 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 SCYL1Q96KG9 808 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 LRGUKQ96M69 825 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 HAPLN3Q96S86 360 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 MRPL40Q9NQ50 206 aaKnown RBP13.29□□□□□ -0.28
USB1-207ENST00000563149 ANLNQ9NQW6 1124 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 RNF19AQ9NV58 838 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 DDIT4Q9NX09 232 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 HACD3Q9P035 362 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 INPP5FQ9Y2H2 1132 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 ACOT9Q9Y305 439 aa13.29□□□□□ -0.28
USB1-207ENST00000563149 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.29□□□□□ -0.28
USB1-207ENST00000563149 TRPC5OSA6NMA1 111 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 AP1G2O75843 785 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 ANXA9O76027 345 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 JCHAINP01591 159 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 CAPNS1P04632 268 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 ME2P23368 584 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 HTR7P34969 479 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 HSPA13P48723 471 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 RAB27AP51159 221 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 CRYBB1P53674 252 aaPredicted RBP13.28□□□□□ -0.28
USB1-207ENST00000563149 ADAM17P78536 824 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 DLG1Q12959 904 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 ADGRE1Q14246 886 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 FLOT2Q14254 428 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 FAM35AQ86V20 835 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 SCML4Q8N228 414 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 FSTL5Q8N475 847 aaPredicted RBP13.28□□□□□ -0.28
USB1-207ENST00000563149 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
USB1-207ENST00000563149 DCUN1D1Q96GG9 259 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
USB1-207ENST00000563149 FCRL5Q96RD9 977 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 CDRT15Q96T59 188 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 APBA2Q99767 749 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 SMOQ99835 787 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 TINF2Q9BSI4 451 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 UBE2OQ9C0C9 1292 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms