RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 PPP2R2CQ9Y2T4 447 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 ARIH1Q9Y4X5 557 aaPredicted RBP17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 WDR87Q6ZQQ6 2873 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 PLK4O00444 970 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 MID1O15344 667 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 NRDCO43847 1150 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 TMCC1O94876 653 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 CTSLP07711 333 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 GKP32189 559 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 CTNNA1P35221 906 aaKnown RBP17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 CDKN2BP42772 138 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 PSMD8P48556 350 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 TPMTP51580 245 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 ADCY2Q08462 1091 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 PAFAH1B3Q15102 231 aaKnown RBP17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 ODF2Q5BJF6 829 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 ATXN7L2Q5T6C5 722 aaPredicted RBP17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 KAZNQ674X7 775 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 ZNF776Q68DI1 518 aaPredicted RBP17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 CEP68Q76N32 757 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 FAM124AQ86V42 546 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 RFX6Q8HWS3 928 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 KATNAL2Q8IYT4 538 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 DEFB119Q8N690 84 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 PLD5Q8N7P1 536 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 OR6K2Q8NGY2 324 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 TSGA10Q9BZW7 698 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 ITM2CQ9NQX7 267 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 UBA2Q9UBT2 640 aaPredicted RBP17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 PCDHA3Q9Y5H8 950 aa17.77■□□□□ 0.44
CCNDBP1-204ENST00000563065 IGHV1OR15-9A0A0B4J2B8 117 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 ZSCAN5CA6NGD5 496 aaPredicted RBP17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 MCF2LO15068 1137 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 KRT86O43790 486 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 IL1BP01584 269 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 ACADMP11310 421 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 PEX5P50542 639 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 DYNLT1P63172 113 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 ELAVL3Q14576 367 aaKnown RBP17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 CST6Q15828 149 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 IFI16Q16666 785 aaKnown RBP17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 CARD16Q5EG05 197 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 FAM182AQ5T1J6 154 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 AADACL2Q6P093 401 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 NPNTQ6UXI9 565 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 SPOCD1Q6ZMY3 1216 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 PEX26Q7Z412 305 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 RNF10Q8N5U6 811 aaKnown RBP17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 OR8D1Q8WZ84 308 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 ALG3Q92685 438 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 MAK16Q9BXY0 300 aaKnown RBP17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 CEP44Q9C0F1 390 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 SP110Q9HB58 689 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 USP36Q9P275 1121 aaKnown RBP17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 SERGEFQ9UGK8 458 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 AMFRQ9UKV5 643 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 PPM1HQ9ULR3 514 aa17.76■□□□□ 0.43
CCNDBP1-204ENST00000563065 MAFKO60675 156 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 RNASEH1O60930 286 aaKnown RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 ZRANB2O95218 330 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 DNTTP04053 509 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 CTNNA2P26232 953 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 CHRNA3P32297 505 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 SLC8A1P32418 973 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 CNR2P34972 360 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 SERPINB6P35237 376 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 GEMIN4P57678 1058 aaKnown RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 TAZQ16635 292 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 INO80DQ53TQ3 878 aaPredicted RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 ARSIQ5FYB1 569 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 SLC9A4Q6AI14 798 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 METTL3Q86U44 580 aaKnown RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 RCOR2Q8IZ40 523 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 RYBPQ8N488 228 aaPredicted RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 PCDH20Q8N6Y1 951 aaKnown RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 SUMF1Q8NBK3 374 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 VOPP1Q96AW1 172 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 EXOC2Q96KP1 924 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 DUSP15Q9H1R2 295 aaPredicted RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 EPC1Q9H2F5 836 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 FBRSQ9HAH7 460 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 DTLQ9NZJ0 730 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 SAE1Q9UBE0 346 aaPredicted RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 HECAQ9UBI9 543 aaPredicted RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 GPR179Q6PRD1 2367 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 NUMA1Q14980 2115 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 CXorf51AA0A1B0GTR3 108 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 A0A1W2PP55 124 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 ZNF217O75362 1048 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 PEX11BO96011 259 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 C7P10643 843 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 CCNHP51946 323 aaPredicted RBP17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 IL10RBQ08334 325 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 SLC10A7Q0GE19 358 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 PLK5Q496M5 336 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 B4GALNT4Q76KP1 1039 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 CCDC50Q8IVM0 306 aa17.75■□□□□ 0.43
CCNDBP1-204ENST00000563065 TMEFF1Q8IYR6 380 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms