RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 LOC102724159A0A0B4J2E5 919 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 AGAP5A6NIR3 686 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 KRT36O76013 467 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 NEURL1O76050 574 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 HEXIM1O94992 359 aaKnown RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 CST5P28325 142 aaPredicted RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 CXCR3P49682 368 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 MCM2P49736 904 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 CDK7P50613 346 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 RCAN1P53805 252 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 ZP1P60852 638 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 TRAF2Q12933 501 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 PDCLQ13371 301 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 DHX8Q14562 1220 aaKnown RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 PWP2Q15269 919 aaKnown RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 ADCK5Q3MIX3 580 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 FSCBQ5H9T9 825 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 GORABQ5T7V8 394 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 C8orf82Q6P1X6 216 aaPredicted RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 OR6Y1Q8NGX8 325 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 SLC2A12Q8TD20 617 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 SCLT1Q96NL6 688 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 DUX5Q96PT3 197 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 NODALQ96S42 347 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 WDR77Q9BQA1 342 aaPredicted RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 FAM167BQ9BTA0 163 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 DDX23Q9BUQ8 820 aaKnown RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 OSBPL5Q9H0X9 879 aaPredicted RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 SFXN1Q9H9B4 322 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 TMLHEQ9NVH6 421 aa3.38□□□□□ -1.87
DENND4A-205ENST00000562540 SRP68Q9UHB9 627 aaKnown RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 COPG1Q9Y678 874 aaKnown RBP3.38□□□□□ -1.87
DENND4A-205ENST00000562540 I6L893 689 aaPredicted RBP3.37□□□□□ -1.87
DENND4A-205ENST00000562540 MSI1O43347 362 aaKnown RBP3.37□□□□□ -1.87
DENND4A-205ENST00000562540 BUB3O43684 328 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 LIASO43766 372 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 PIP5K1CO60331 668 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 KRT38O76015 456 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 KAT7O95251 611 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 CYP3A4P08684 503 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 ALDOCP09972 364 aaKnown RBP3.37□□□□□ -1.87
DENND4A-205ENST00000562540 IGFBP2P18065 325 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 FOXL2P58012 376 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 SHC2P98077 582 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 SLC39A14Q15043 492 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 PLCB4Q15147 1175 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 TAF5Q15542 800 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 HLFQ16534 295 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 TDRD12Q587J7 1177 aaKnown RBP3.37□□□□□ -1.87
DENND4A-205ENST00000562540 C10orf76Q5T2E6 689 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 ANKRD45Q5TZF3 282 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 HIST2H2BCQ6DN03 193 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 FJX1Q86VR8 437 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 CAMK1DQ8IU85 385 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 ADGRF3Q8IZF5 1079 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 CLIP4Q8N3C7 705 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 SLC25A41Q8N5S1 370 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 CLEC4CQ8WTT0 213 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 PIGSQ96S52 555 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 ISCA1Q9BUE6 129 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 POLDIP3Q9BY77 421 aaKnown RBP3.37□□□□□ -1.87
DENND4A-205ENST00000562540 DDX31Q9H8H2 851 aaKnown RBP3.37□□□□□ -1.87
DENND4A-205ENST00000562540 PDE11AQ9HCR9 933 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 PNRC2Q9NPJ4 139 aaKnown RBP3.37□□□□□ -1.87
DENND4A-205ENST00000562540 G6PC2Q9NQR9 355 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 RNF146Q9NTX7 359 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 KIF17Q9P2E2 1029 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 KCND3Q9UK17 655 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 LZTS1Q9Y250 596 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 TNFSF13BQ9Y275 285 aa3.37□□□□□ -1.87
DENND4A-205ENST00000562540 ARID4BQ4LE39 1312 aaPredicted RBP3.37□□□□□ -1.87
DENND4A-205ENST00000562540 CYP3A7-CYP3A51PA0A087WV96 503 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 PRR23AA6NEV1 266 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 E7EVH7 732 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 GRM8O00222 908 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 VWA5AO00534 786 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 HNRNPRO43390 633 aaKnown RBP3.36□□□□□ -1.87
DENND4A-205ENST00000562540 IGLV2-11P01706 119 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 LCKP06239 509 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 SP1P08047 785 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 SNRNP70P08621 437 aaKnown RBP3.36□□□□□ -1.87
DENND4A-205ENST00000562540 DHRS4L1P0CG22 281 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 CHRNB2P17787 502 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 CYP3A7P24462 503 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 ADD2P35612 726 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 AARSP49588 968 aaKnown RBP eCLIP3.36□□□□□ -1.87
DENND4A-205ENST00000562540 PAPOLAP51003 745 aaKnown RBP3.36□□□□□ -1.87
DENND4A-205ENST00000562540 RBM5P52756 815 aaKnown RBP eCLIP3.36□□□□□ -1.87
DENND4A-205ENST00000562540 PMS2P54278 862 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 CUL4BQ13620 913 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 ZRSR1Q15695 479 aaKnown RBP3.36□□□□□ -1.87
DENND4A-205ENST00000562540 ZRSR2Q15696 482 aaKnown RBP3.36□□□□□ -1.87
DENND4A-205ENST00000562540 SMAD1Q15797 465 aaKnown RBP3.36□□□□□ -1.87
DENND4A-205ENST00000562540 KIF19Q2TAC6 998 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 LDHAL6AQ6ZMR3 332 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 Q6ZSV7 163 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 SYT13Q7L8C5 426 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 C2CD5Q86YS7 1000 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms