RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ARID3BQ8IVW6 561 aaPredicted RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 CRIPAKQ8N1N5 446 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 PPHLN1Q8NEY8 458 aaKnown RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 PPP1R14CQ8TAE6 165 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 ZNF778Q96MU6 729 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 TMEM237Q96Q45 408 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 THAP1Q9NVV9 213 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 DONSONQ9NYP3 566 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 TMEM216Q9P0N5 145 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 MARCH2Q9P0N8 246 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 HBS1LQ9Y450 684 aaKnown RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 TBKBP1A7MCY6 615 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 NT5C1B-RDH14C9J2C7 533 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 PMPCBO75439 489 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 CNTN5O94779 1100 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 IGLV3-27P01718 113 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 RASSF2P50749 326 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 POU6F1Q14863 301 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 CCDC153Q494R4 210 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 ALFQ53S48 1182 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 POTEHQ6S545 545 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 ANKS3Q6ZW76 656 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 MIB1Q86YT6 1006 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 C2orf15Q8WU43 125 aaKnown RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 PTCD2Q8WV60 388 aaKnown RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 SLC7A6OSQ96CW6 309 aaPredicted RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 HMCESQ96FZ2 354 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 VPS39Q96JC1 886 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 MRGPRX2Q96LB1 330 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 FSD1LQ9BXM9 530 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 OXCT2Q9BYC2 517 aaPredicted RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 C20orf27Q9GZN8 174 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 MRM3Q9HC36 420 aaKnown RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 FBXO6Q9NRD1 293 aaPredicted RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 LNPEPQ9UIQ6 1025 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.96□□□□□ -0.81
SMG1-205ENST00000561947 SLC12A8A0AV02 714 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 CCDC78A2IDD5 438 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 C2orf71A6NGG8 1288 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 TRAFD1O14545 582 aaPredicted RBP9.96□□□□□ -0.81
SMG1-205ENST00000561947 HNRNPCL1O60812 293 aaKnown RBP9.96□□□□□ -0.81
SMG1-205ENST00000561947 PBX3P40426 434 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 ABCG1P45844 678 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 HNRNPDQ14103 355 aaKnown RBP9.96□□□□□ -0.81
SMG1-205ENST00000561947 RAP1GAP2Q684P5 730 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 CLEC14AQ86T13 490 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 TMEM173Q86WV6 379 aaPredicted RBP9.96□□□□□ -0.81
SMG1-205ENST00000561947 ZNF296Q8WUU4 475 aaPredicted RBP9.96□□□□□ -0.81
SMG1-205ENST00000561947 IGSF8Q969P0 613 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 TTPALQ9BTX7 342 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 TUBB6Q9BUF5 446 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 SLC25A51Q9H1U9 297 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 NOD2Q9HC29 1040 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 STK38LQ9Y2H1 464 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 TCAF1Q9Y4C2 921 aa9.96□□□□□ -0.81
SMG1-205ENST00000561947 A0A096LPK6 155 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 GOLGA8TH3BQL2 631 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 SERPINE1P05121 402 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 HMBSP08397 361 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 ZDHHC11BP0C7U3 371 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 MAP2K2P36507 400 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 GMPRP36959 345 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 HADHAP40939 763 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 RENBPP51606 427 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 DUSP4Q13115 394 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 ACBD5Q5T8D3 534 aaPredicted RBP9.96□□□□□ -0.82
SMG1-205ENST00000561947 FAM91A1Q658Y4 838 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 FBXL22Q6P050 247 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 KDELC1Q6UW63 502 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 RANBP10Q6VN20 620 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 TAS1R1Q7RTX1 841 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 C10orf107Q8IVU9 208 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 CNTN4Q8IWV2 1026 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 PLD6Q8N2A8 252 aaKnown RBP9.96□□□□□ -0.82
SMG1-205ENST00000561947 SH3TC2Q8TF17 1288 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 BCL7CQ8WUZ0 217 aaPredicted RBP9.96□□□□□ -0.82
SMG1-205ENST00000561947 UTP4Q969X6 686 aaKnown RBP9.96□□□□□ -0.82
SMG1-205ENST00000561947 GPR22Q99680 433 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 WWP1Q9H0M0 922 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 UNC93B1Q9H1C4 597 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 RHOJQ9H4E5 214 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 CAB39LQ9H9S4 337 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 SP110Q9HB58 689 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 ZNF358Q9NW07 568 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 COPG2Q9UBF2 871 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 BAIAP2L1Q9UHR4 511 aa9.96□□□□□ -0.82
SMG1-205ENST00000561947 MICAL3Q7RTP6 2002 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 E2F8A0AVK6 867 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 DRGXA6NNA5 263 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 SLC38A8A6NNN8 435 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 J3KR12 359 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 FCHO1O14526 889 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 CHUKO15111 745 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 C2P06681 752 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 KITP10721 976 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 GRK2P25098 689 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 SLC1A6P48664 564 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 WNT3AP56704 352 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 RING1Q06587 406 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 KRT72Q14CN4 511 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms