RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CPB2Q96IY4 423 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 PGBD1Q96JS3 809 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 SLC46A2Q9BY10 475 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 POFUT1Q9H488 388 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 GAREM1Q9H706 876 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 ECT2Q9H8V3 914 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.09□□□□□ -1.75
HERC1-211ENST00000560983 THG1LQ9NWX6 298 aaKnown RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 USP36Q9P275 1121 aaKnown RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 MAGEC2Q9UBF1 373 aaPredicted RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 DKK2Q9UBU2 259 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 PLEKHB1Q9UF11 243 aaPredicted RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 MMP17Q9ULZ9 603 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 CCL26Q9Y258 94 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 MTCL1Q9Y4B5 1905 aaKnown RBP4.09□□□□□ -1.76
HERC1-211ENST00000560983 EML5Q05BV3 1969 aa4.09□□□□□ -1.76
HERC1-211ENST00000560983 ADGRG4Q8IZF6 3080 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 IGHV1OR15-9A0A0B4J2B8 117 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 A0A0D9SFI3 127 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 ANO9A1A5B4 782 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 AHRRA9YTQ3 701 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 MUC22E2RYF6 1773 aaPredicted RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 TMEM189-UBE2V1I3L0A0 370 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 K7ENP7 123 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 SGK1O00141 431 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 FLRT2O43155 660 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 HOXA3O43365 443 aaPredicted RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 HMMRO75330 724 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 B3GAT3O94766 335 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 ALDH1A2O94788 518 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 PRKCBP05771 671 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 PTPRBP23467 1997 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 SMARCA1P28370 1054 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 TNFRSF8P28908 595 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 FLT3P36888 993 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 SREBF1P36956 1147 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 BRCC3P46736 316 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 ARPP19P56211 112 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 WNT3AP56704 352 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 CCDC157Q569K6 752 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 EMC10Q5UCC4 262 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 TPGS2Q68CL5 300 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 LMBRD2Q68DH5 695 aaPredicted RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 INO80CQ6PI98 192 aaPredicted RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 SLC36A4Q6YBV0 504 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 UBE2R2Q712K3 238 aaPredicted RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 CYB5R4Q7L1T6 521 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 DOK3Q7L591 496 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 GPRIN1Q7Z2K8 1008 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 DNAJB7Q7Z6W7 309 aaPredicted RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 PLA2G4DQ86XP0 818 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 SFTPA1Q8IWL2 248 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 ELMOD1Q8N336 334 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 IL17RCQ8NAC3 791 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 BEST2Q8NFU1 509 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 OTUD7AQ8TE49 926 aaPredicted RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 DNASE2BQ8WZ79 361 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 ARL8AQ96BM9 186 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 CCDC51Q96ER9 411 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 HIST1H2AHQ96KK5 128 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 LGMNQ99538 433 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 HIST1H2AJQ99878 128 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 SPZ1Q9BXG8 430 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 CPEB1Q9BZB8 566 aaKnown RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 FAM124BQ9H5Z6 455 aaPredicted RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 TASP1Q9H6P5 420 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 CELSR2Q9HCU4 2923 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 TBC1D22BQ9NU19 505 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 ZBTB40Q9NUA8 1239 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 ING3Q9NXR8 418 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 H2AFY2Q9P0M6 372 aaPredicted RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 AFF4Q9UHB7 1163 aaKnown RBP4.08□□□□□ -1.76
HERC1-211ENST00000560983 FBXL5Q9UKA1 691 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 MAFFQ9ULX9 164 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 PCDHGA1Q9Y5H4 931 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 COL4A3BPQ9Y5P4 624 aa4.08□□□□□ -1.76
HERC1-211ENST00000560983 A0A1B0GUA9 196 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 KLK10O43240 276 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 EDIL3O43854 480 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 RHOBTB3O94955 611 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 LY86O95711 162 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 THP07101 528 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 ARF4P18085 180 aaPredicted RBP4.07□□□□□ -1.76
HERC1-211ENST00000560983 CD40P25942 277 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 AXLP30530 894 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 OPRD1P41143 372 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 GPR15P49685 360 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 CLCNKBP51801 687 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 MRPS21P82921 87 aaKnown RBP4.07□□□□□ -1.76
HERC1-211ENST00000560983 CD69Q07108 199 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 LAMTOR4Q0VGL1 99 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 MRPL49Q13405 166 aaKnown RBP4.07□□□□□ -1.76
HERC1-211ENST00000560983 UPP1Q16831 310 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 FAM214AQ32MH5 1076 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 XKR3Q5GH77 459 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 LY6G5CQ5SRR4 150 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 BROXQ5VW32 411 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 NOTUMQ6P988 496 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 ANO5Q75V66 913 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 CDR2LQ86X02 465 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms