RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ILVBLA1L0T0 632 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 C2orf71A6NGG8 1288 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 C5orf67F2Z3F1 127 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 ZWINTO95229 277 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 HOXD9P28356 352 aaPredicted RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 GABRR2P28476 465 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 CA8P35219 290 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 CTNNB1P35222 781 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 WDR4P57081 412 aaKnown RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 RPS24P62847 133 aaKnown RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 SMAD3P84022 425 aaKnown RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 DNAJC3Q13217 504 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 LBRQ14739 615 aaKnown RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 LRRC14Q15048 493 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 ANKRD20A4Q4UJ75 823 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 POTEHQ6S545 545 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 Q6ZNB5 142 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 TIFABQ6ZNK6 161 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 GAREM2Q75VX8 874 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 FAM217AQ8IXS0 508 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 UNC5BQ8IZJ1 945 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNX1-211ENST00000560829 IPMKQ8NFU5 416 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 ZNF473Q8WTR7 871 aaKnown RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 PTCD2Q8WV60 388 aaKnown RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 CERS2Q96G23 380 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 APOL2Q9BQE5 337 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 MTIF3Q9H2K0 278 aaKnown RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 ATP13A1Q9HD20 1204 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 TM9SF1O15321 606 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 UGT1A9O60656 530 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 SPAG7O75391 227 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 GLUD1P00367 558 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 IRF1P10914 325 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 HDCP19113 662 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 DRD4P21917 467 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 CA4P22748 312 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 CDC25CP30307 473 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 SLC7A9P82251 487 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 PCID2Q5JVF3 399 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 TXNDC8Q6A555 127 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 ALG1LQ6GMV1 187 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 ZNF783Q6ZMS7 281 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 ZNF354CQ86Y25 554 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 ARL14EPQ8N8R7 260 aaPredicted RBP13.11□□□□□ -0.31
SNX1-211ENST00000560829 ARRDC2Q8TBH0 407 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 SPPL3Q8TCT6 385 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 MGARPQ8TDB4 240 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 DYDC1Q8WWB3 177 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 MRPS31Q92665 395 aaKnown RBP13.11□□□□□ -0.31
SNX1-211ENST00000560829 ZNF669Q96BR6 464 aaPredicted RBP13.11□□□□□ -0.31
SNX1-211ENST00000560829 SERAC1Q96JX3 654 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 CYP2S1Q96SQ9 504 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 FICDQ9BVA6 458 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 MRM3Q9HC36 420 aaKnown RBP13.11□□□□□ -0.31
SNX1-211ENST00000560829 TRPC7Q9HCX4 862 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 ALG13Q9NP73 1137 aaKnown RBP13.11□□□□□ -0.31
SNX1-211ENST00000560829 NT5MQ9NPB1 228 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 MKS1Q9NXB0 559 aa13.11□□□□□ -0.31
SNX1-211ENST00000560829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.1□□□□□ -0.31
SNX1-211ENST00000560829 A0A0D9SEW6 157 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 HMX2A2RU54 273 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 LINC01553A4QN01 128 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 HIDE1A8MVS5 230 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 TRIM49D1C9J1S8 452 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 KDELR3O43731 214 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 ATP9BO43861 1147 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 MMP2P08253 660 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 RPA3P35244 121 aaPredicted RBP13.1□□□□□ -0.31
SNX1-211ENST00000560829 CCNFP41002 786 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 SGSHP51688 502 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 WNT3AP56704 352 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 ZXDBP98169 803 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 IL9RQ01113 521 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 ZNF177Q13360 481 aaPredicted RBP13.1□□□□□ -0.31
SNX1-211ENST00000560829 PACS1Q6VY07 963 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 ELMOD1Q8N336 334 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 PGBD5Q8N414 524 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 OR52K2Q8NGK3 314 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 POF1BQ8WVV4 589 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 MAGEB18Q96M61 343 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 FSD1LQ9BXM9 530 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 ACE2Q9BYF1 805 aaPredicted RBP13.1□□□□□ -0.31
SNX1-211ENST00000560829 POLR1EQ9GZS1 481 aaKnown RBP13.1□□□□□ -0.31
SNX1-211ENST00000560829 RABEP2Q9H5N1 569 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 SMPD4Q9NXE4 827 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 PRKAG3Q9UGI9 489 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 CPQQ9Y646 472 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 NYNRINQ9P2P1 1898 aaKnown RBP13.1□□□□□ -0.31
SNX1-211ENST00000560829 PMPCBO75439 489 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 RFPL1O75677 317 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 RHOCP08134 193 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 TPH1P17752 444 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 DNAJB1P25685 340 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 ETFBP38117 255 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 CLCN4P51793 760 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms