RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 CXorf57Q6NSI4 855 aaKnown RBP5.54□□□□□ -1.52
ZEB1-219ENST00000560721 RINLQ6ZS11 566 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 ACOT1Q86TX2 421 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 TAC4Q86UU9 113 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 EXOC3L1Q86VI1 746 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 GBP7Q8N8V2 638 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-219ENST00000560721 C7orf57Q8NEG2 295 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 KAT5Q92993 513 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 CCDC127Q96BQ5 260 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 MIEF2Q96C03 454 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 SHDQ96IW2 340 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 ZC3H10Q96K80 434 aaKnown RBP5.54□□□□□ -1.52
ZEB1-219ENST00000560721 MRGPRX3Q96LB0 322 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 PSKH2Q96QS6 385 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 UBE2ZQ9H832 354 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-219ENST00000560721 LRRC4Q9HBW1 653 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 PRDM9Q9NQV7 894 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 ARHGEF3Q9NR81 526 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 NSMCE4AQ9NXX6 385 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 USP36Q9P275 1121 aaKnown RBP5.54□□□□□ -1.52
ZEB1-219ENST00000560721 USP18Q9UMW8 372 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 HCFC2Q9Y5Z7 792 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 ACTL7BQ9Y614 415 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 LRRK1Q38SD2 2015 aa5.54□□□□□ -1.52
ZEB1-219ENST00000560721 TRBV5-4A0A0C4DH59 114 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 MCF2LO15068 1137 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 LIASO43766 372 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 RNF8O76064 485 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 WISP3O95389 354 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CA3P07451 260 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CYC1P08574 325 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ZNF30P17039 623 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ITIH2P19823 946 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 RPS3P23396 243 aaKnown RBP eCLIP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 IVDP26440 423 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 MZF1P28698 734 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 COILP38432 576 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 SP4Q02446 784 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 BNIP1Q12981 228 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CDKN3Q16667 212 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 PARP6Q2NL67 630 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 NADSYN1Q6IA69 706 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CCDC137Q6PK04 289 aaKnown RBP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 TIFABQ6ZNK6 161 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 TAOK1Q7L7X3 1001 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 LINC00523Q86TU6 105 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CADM4Q8NFZ8 388 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ZBTB10Q96DT7 871 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 GAS2L1Q99501 681 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 C17orf80Q9BSJ5 609 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CENPOQ9BU64 300 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 PPP1R12CQ9BZL4 782 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ULBP1Q9BZM6 244 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ZHX3Q9H4I2 956 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 RMI1Q9H9A7 625 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ERVMER34-1Q9H9K5 563 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 NOD2Q9HC29 1040 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 DLGAP2Q9P1A6 1054 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 SUN2Q9UH99 717 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 LGALS13Q9UHV8 139 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ZNF180Q9UJW8 692 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 HES2Q9Y543 173 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 IGLV3-16A0A075B6K0 115 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 LCHNA4D1U4 455 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 SYNDIG1LA6NDD5 238 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CASTOR2A6NHX0 329 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 E9PAM4 449 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 RGS16O15492 202 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ARHGEF15O94989 841 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 APOEP02649 317 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 RHOP08100 348 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 TACR2P21452 398 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CA4P22748 312 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 RRM1P23921 792 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CNTFP26441 200 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 NPY2RP49146 381 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 TBX4P57082 545 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ZP2Q05996 745 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 TWF1Q12792 350 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 NR1H3Q13133 447 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 SPDYAQ5MJ70 313 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 UBAP2Q5T6F2 1119 aaKnown RBP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 SPOPLQ6IQ16 392 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 RFX8Q6ZV50 586 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 SLC26A11Q86WA9 606 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 FRS2Q8WU20 508 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 RXFP2Q8WXD0 754 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ZNF653Q96CK0 615 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 LINC00615Q96LM1 132 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 PI4K2AQ9BTU6 479 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 CENPHQ9H3R5 247 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ZWILCHQ9H900 591 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 SLC28A3Q9HAS3 691 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 PREBQ9HCU5 417 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 MTRF1LQ9UGC7 380 aaKnown RBP5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ARHGAP42A6NI28 874 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 ATG13O75143 517 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 TBX10O75333 385 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 BEST1O76090 585 aa5.53□□□□□ -1.52
ZEB1-219ENST00000560721 HOXD11P31277 338 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms