RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 ACADMP11310 421 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 CKBP12277 381 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 FMO4P31512 558 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 MAPK8P45983 427 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 STXBP5Q5T5C0 1151 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 DNAAF5Q86Y56 855 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 ZFP28Q8NHY6 868 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 S100ZQ8WXG8 99 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 TBC1D10AQ9BXI6 508 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 CLN6Q9NWW5 311 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 MCM8Q9UJA3 840 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 TPP1O14773 563 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 KPNA5O15131 536 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 AHCYL1O43865 530 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 NUDT17P0C025 328 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 PAX7P23759 505 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 SERPINA4P29622 427 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 GSTT1P30711 240 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 COPZ1P61923 177 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 BIKQ13323 160 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 AAGABQ6PD74 315 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 BHLHB9Q6PI77 547 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 RDH11Q8TC12 318 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 AGAP11Q8TF27 550 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 YME1L1Q96TA2 773 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 SPATC1LQ9H0A9 340 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 PTPRHQ9HD43 1115 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 ABCC13Q9NSE7 274 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 UNC13BO14795 1591 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 SPATA31A1Q5TZJ5 1347 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 UBE2QL1A1L167 161 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 ANKDD1BA6NHY2 528 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 CELF2O95319 508 aaKnown RBP13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 SEC24AO95486 1093 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 CAPN1P07384 714 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 UMPSP11172 480 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 COX4I1P13073 169 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 POLD2P49005 469 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 CLK2P49760 499 aaKnown RBP13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 XIAPP98170 497 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 DMPKQ09013 629 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 MAPKAPK3Q16644 382 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 LIN54Q6MZP7 749 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 SMIM5Q71RC9 77 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 DHDDSQ86SQ9 333 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 TTC7BQ86TV6 843 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 LGI2Q8N0V4 545 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 CERS2Q96G23 380 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 C1QTNF7Q9BXJ2 289 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 CCNB1IP1Q9NPC3 277 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 TBC1D30Q9Y2I9 924 aa13.37□□□□□ -0.27
CSPG4P11-201ENST00000560634 A0A0B4J269 797 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 LOC100506127A0A0U1RQW1 187 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 CARNS1A5YM72 827 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 BIRC5O15392 142 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 HNMTP50135 292 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 PPATQ06203 517 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 NRF1Q16656 503 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 CBWD6Q4V339 395 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 C16orf46Q6P387 395 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 COMMD2Q86X83 199 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 FBXO30Q8TB52 745 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 EPS8L1Q8TE68 723 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 NARS2Q96I59 477 aaKnown RBP13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 MRPL9Q9BYD2 267 aaKnown RBP13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 LRRC19Q9H756 370 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 BLOC1S4Q9NUP1 217 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 THG1LQ9NWX6 298 aaKnown RBP13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 C2CD2Q9Y426 696 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 E5RJQ4 531 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 F8VP50 259 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 ZW10O43264 779 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 S100A9P06702 114 aaKnown RBP13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 ACAT1P24752 427 aaKnown RBP13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 GRIA3P42263 894 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 PDK3Q15120 406 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 DENND6AQ8IWF6 608 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 OR52L1Q8NGH7 329 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 FAM210AQ96ND0 272 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 TKTL2Q9H0I9 626 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 ATXN3LQ9H3M9 355 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 ERGIC3Q9Y282 383 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 GMPPBQ9Y5P6 360 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 SALL1Q9NSC2 1324 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 LACTBL1A8MY62 500 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 WWP2O00308 870 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 TEX28O15482 410 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 ITGB3BPQ13352 177 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 CAMKK1Q8N5S9 505 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 RNASE11Q8TAA1 199 aaKnown RBP13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 NKX2-3Q8TAU0 364 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 HASPINQ8TF76 798 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 EEF1AKMT1Q8WVE0 214 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 SETD4Q9NVD3 440 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms