RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ENDOVQ8N8Q3 282 aaKnown RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 PPHLN1Q8NEY8 458 aaKnown RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 SPPL2BQ8TCT7 592 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 CALML6Q8TD86 181 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 UTP4Q969X6 686 aaKnown RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 SPATA17Q96L03 361 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 FCRL2Q96LA5 508 aaPredicted RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 TSNARE1Q96NA8 513 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 FCRL3Q96P31 734 aaPredicted RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 AGAP3Q96P47 875 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 CDK5RAP1Q96SZ6 601 aaKnown RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 TMEM175Q9BSA9 504 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 FAM167BQ9BTA0 163 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 CEP41Q9BYV8 373 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 UBE2OQ9C0C9 1292 aaKnown RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 ARHGAP39Q9C0H5 1083 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 SLC25A51Q9H1U9 297 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 C12orf65Q9H3J6 166 aaKnown RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 ALG13Q9NP73 1137 aaKnown RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 MRGBPQ9NV56 204 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.87□□□□□ -0.83
RTF1-206ENST00000560447 TMEM248Q9NWD8 314 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 COPG2Q9UBF2 871 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 CACNG4Q9UBN1 327 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 CDY1Q9Y6F8 540 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 VWA8A3KMH1 1905 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 CAPN14A8MX76 684 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 SLCO1B7G3V0H7 640 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 H7C4K7 107 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 AMHP03971 560 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 ERVK-10P10266 1014 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 RALBP11234 206 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 CPA3P15088 417 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 HOXB8P17481 243 aaPredicted RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 AOC1P19801 751 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 CRABP2P29373 138 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 PRDX6P30041 224 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 ADRA1AP35348 466 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 SERPINB5P36952 375 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 SLC1A6P48664 564 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 APLP1P51693 650 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 GTF2A1P52655 376 aaPredicted RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 YBEYP58557 167 aaPredicted RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 ABCE1P61221 599 aaKnown RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 CRADDP78560 199 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 BFSP2Q13515 415 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 ARHGEF6Q15052 776 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 TRIP4Q15650 581 aaPredicted RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 TSNAXIP1Q2TAA8 658 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 SLC39A12Q504Y0 691 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 CMPK2Q5EBM0 449 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 CLLU1OSQ5K130 101 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 ARTNQ5T4W7 220 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 METTL21CQ5VZV1 264 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 FSTL4Q6MZW2 842 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 LONP2Q86WA8 852 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 TP53INP2Q8IXH6 220 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 KIF2BQ8N4N8 673 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 SCAMP5Q8TAC9 235 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 AGAP11Q8TF27 550 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 NSMCE1Q8WV22 266 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 SCG3Q8WXD2 468 aaKnown RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 CASP10Q92851 521 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 PEX13Q92968 403 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 THOC1Q96FV9 657 aaKnown RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 BTN2A3PQ96KV6 586 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 TMEM209Q96SK2 561 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 TRIM56Q9BRZ2 755 aaKnown RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 MECRQ9BV79 373 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 MRPL9Q9BYD2 267 aaKnown RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 RHOBTB2Q9BYZ6 727 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 ZYG11BQ9C0D3 744 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 DCLRE1BQ9H816 532 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 RNPEPL1Q9HAU8 725 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 TRPC7Q9HCX4 862 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 PRDM5Q9NQX1 630 aaPredicted RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 C20orf96Q9NUD7 363 aaPredicted RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 TRMT13Q9NUP7 481 aaKnown RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 ARL8BQ9NVJ2 186 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 TAGLN3Q9UI15 199 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 ABT1Q9ULW3 272 aaKnown RBP9.86□□□□□ -0.83
RTF1-206ENST00000560447 STK38LQ9Y2H1 464 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 TCAF1Q9Y4C2 921 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 PCDHB12Q9Y5F1 795 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 NR2E3Q9Y5X4 410 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 PSAT1Q9Y617 370 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 HS3ST4Q9Y661 456 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 CHD5Q8TDI0 1954 aa9.86□□□□□ -0.83
RTF1-206ENST00000560447 TANC1Q9C0D5 1861 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 A0A096LPK6 155 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 A0A1W2PQH9 124 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 HEATR9A2RTY3 570 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 F8W8V4 182 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 SPECC1L-ADORA2AF8WAN1 911 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 ARVCFO00192 962 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 DFFAO00273 331 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 SLC22A2O15244 555 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 GYG2O15488 501 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 GSC2O15499 205 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 TADA2AO75478 443 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms