RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3Q8IZP1 549 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 SH2D3CQ8N5H7 860 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 MYRIPQ8NFW9 859 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 SYN2Q92777 582 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 PGAP3Q96FM1 320 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 CNDP2Q96KP4 475 aaKnown RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 CCDC42Q96M95 316 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 FEM1AQ9BSK4 669 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 C2orf49Q9BVC5 232 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 MYO1AQ9UBC5 1043 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 OR51B4Q9Y5P0 310 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 ADGRG1Q9Y653 693 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 EPN1Q9Y6I3 576 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 UQCRHLA0A096LP55 91 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 M0QYT0 321 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 RNGTTO60942 597 aaKnown RBP13.9□□□□□ -0.18
SMAD3-214ENST00000560402 PAGE1O75459 146 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 GRAP2O75791 330 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 NDUFA10O95299 355 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 F9P00740 461 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 UQCRHP07919 91 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 HNRNPH3P31942 346 aaKnown RBP13.9□□□□□ -0.18
SMAD3-214ENST00000560402 CDH5P33151 784 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-214ENST00000560402 CLCN6P51797 869 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 ILKQ13418 452 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 SHBQ15464 509 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 DLG2Q15700 870 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 ACCSLQ4AC99 568 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 SFMBT2Q5VUG0 894 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 DHRS13Q6UX07 377 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 RAD9BQ6WBX8 426 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 Q6ZVU0 165 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 KIAA1328Q86T90 577 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 SETD3Q86TU7 594 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-214ENST00000560402 GATAD2AQ86YP4 633 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 DCAF4L2Q8NA75 395 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 TMEM35BQ8NCS4 154 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 MSANTD4Q8NCY6 345 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 PIP4K2CQ8TBX8 421 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 NXPE2Q96DL1 559 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 NPY6RQ99463 290 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 TSGA10Q9BZW7 698 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 MUC3BQ9H195 1237 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 SIX2Q9NPC8 291 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 PLCB1Q9NQ66 1216 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 ARHGEF38Q9NXL2 777 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 DNAJC12Q9UKB3 198 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 PPM1HQ9ULR3 514 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 MYO6Q9UM54 1294 aa13.9□□□□□ -0.18
SMAD3-214ENST00000560402 TRABD2BA6NFA1 517 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 PRAMEF26H0Y7S4 382 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 RHOCP08134 193 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 CCDC172P0C7W6 258 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 SRCP12931 536 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 CASQ1P31415 396 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 CXCR3P49682 368 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 ACADVLP49748 655 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 SULT1E1P49888 294 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 CCDC157Q569K6 752 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 OTUD1Q5VV17 481 aaPredicted RBP13.89□□□□□ -0.19
SMAD3-214ENST00000560402 NEK5Q6P3R8 708 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 SLC47A2Q86VL8 602 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 REXO1L1PQ8IX06 675 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 FAM71AQ8IYT1 594 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 OR52K2Q8NGK3 314 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 DESI2Q9BSY9 194 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 WDCPQ9H6R7 721 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 PIGVQ9NUD9 493 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMAD3-214ENST00000560402 ARHGAP20Q9P2F6 1191 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 SARDHQ9UL12 918 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 RAXQ9Y2V3 346 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 DOCK9Q9BZ29 2069 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 BAHCC1Q9P281 2608 aa13.89□□□□□ -0.19
SMAD3-214ENST00000560402 KNTC1P50748 2209 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 ARID1BQ8NFD5 2236 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-214ENST00000560402 EIF3CLB5ME19 914 aaKnown RBP13.88□□□□□ -0.19
SMAD3-214ENST00000560402 DYNC1I1O14576 645 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 WNT9AO14904 365 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 KRT86O43790 486 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 AKR1B10O60218 316 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 RTN2O75298 545 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 LSM8O95777 96 aaKnown RBP13.88□□□□□ -0.19
SMAD3-214ENST00000560402 PRNPP04156 253 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 GGCXP38435 758 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 GABRB2P47870 512 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 IRAK1P51617 712 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 METAP1P53582 386 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 GNG11P61952 73 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 APBA1Q02410 837 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 DEUP1Q05D60 604 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 CNTN1Q12860 1018 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 TUBB2AQ13885 445 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 STAT4Q14765 748 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 COL28A1Q2UY09 1125 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 C6orf118Q5T5N4 469 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 LRRC31Q6UY01 552 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 SYT10Q6XYQ8 523 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 ZNF783Q6ZMS7 281 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms