RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MBLAC2Q68D91 279 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 PLEKHA7Q6IQ23 1121 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 DENND1BQ6P3S1 775 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 MMS22LQ6ZRQ5 1243 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 AHI1Q8N157 1196 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 ARHGAP18Q8N392 663 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 ANKRD52Q8NB46 1076 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 MNS1Q8NEH6 495 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 C11orf70Q9BRQ4 267 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 SYNCQ9H7C4 482 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 EBF2Q9HAK2 575 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 AASDHPPTQ9NRN7 309 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 SERGEFQ9UGK8 458 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 TSPAN16Q9UKR8 245 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 SNX12Q9UMY4 172 aa21.09■□□□□ 0.97
PSEN1-225ENST00000560005 MIF4GDA9UHW6 222 aaKnown RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 MYO1FO00160 1098 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 CES2O00748 559 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 RIOK3O14730 519 aaKnown RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 FANCGO15287 622 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 ATP1A1P05023 1023 aaKnown RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 DLDP09622 509 aaKnown RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 PABPC1P11940 636 aaKnown RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 RRM1P23921 792 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 EPHA8P29322 1005 aaPredicted RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 SLC1A1P43005 524 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 GPD2P43304 727 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 CKAP4Q07065 602 aaKnown RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 PTP4A2Q12974 167 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 TRIP4Q15650 581 aaPredicted RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 NCEH1Q6PIU2 408 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 USP30Q70CQ3 517 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 DNAAF5Q86Y56 855 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 SPACA3Q8IXA5 215 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 WDTC1Q8N5D0 677 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 RSPH9Q9H1X1 276 aaPredicted RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 PABPC3Q9H361 631 aaKnown RBP21.08■□□□□ 0.97
PSEN1-225ENST00000560005 GDF3Q9NR23 364 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 FBXL12Q9NXK8 326 aa21.08■□□□□ 0.97
PSEN1-225ENST00000560005 COL6A6A6NMZ7 2263 aa21.08■□□□□ 0.96
PSEN1-225ENST00000560005 CAPN8A6NHC0 703 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 WNT9AO14904 365 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 YKT6O15498 198 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 BUB1BO60566 1050 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-225ENST00000560005 ATP5BP06576 529 aaKnown RBP21.07■□□□□ 0.96
PSEN1-225ENST00000560005 CD38P28907 300 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 ACTN2P35609 894 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 ACADSBP45954 432 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 GABRB2P47870 512 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 HARS2P49590 506 aaKnown RBP21.07■□□□□ 0.96
PSEN1-225ENST00000560005 BST2Q10589 180 aaKnown RBP21.07■□□□□ 0.96
PSEN1-225ENST00000560005 GOLGA7BQ2TAP0 167 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 TAF1BQ53T94 588 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-225ENST00000560005 KIAA0907Q7Z7F0 614 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-225ENST00000560005 MYRIPQ8NFW9 859 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 TMA16Q96EY4 203 aaKnown RBP21.07■□□□□ 0.96
PSEN1-225ENST00000560005 PBKQ96KB5 322 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 SELENOOQ9BVL4 669 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 TLR10Q9BXR5 811 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 SUN2Q9UH99 717 aa21.07■□□□□ 0.96
PSEN1-225ENST00000560005 ERVH48-1M5A8F1 160 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 GLDCP23378 1020 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 ARRB1P49407 418 aaPredicted RBP21.06■□□□□ 0.96
PSEN1-225ENST00000560005 MAMLD1Q13495 774 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 TBC1D25Q3MII6 688 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 DNAJC24Q6P3W2 148 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 NT5DC3Q86UY8 548 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 PIGZQ86VD9 579 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 ZDHHC17Q8IUH5 632 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 UBL4BQ8N7F7 174 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 C3orf20Q8ND61 904 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 IP6K2Q9UHH9 426 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 SCML1Q9UN30 329 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 CLCA2Q9UQC9 943 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 ALG6Q9Y672 507 aa21.06■□□□□ 0.96
PSEN1-225ENST00000560005 A0A1W2PP55 124 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 A0A1W2PR77 199 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 POLR2EP19388 210 aaKnown RBP21.05■□□□□ 0.96
PSEN1-225ENST00000560005 CD70P32970 193 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 PAFAH1B1P43034 410 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 SGSHP51688 502 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 BNIP3Q12983 259 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 PDCLQ13371 301 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 ILKQ13418 452 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 PKDCCQ504Y2 493 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 DCUN1D2Q6PH85 259 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 WFDC5Q8TCV5 224 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 NDRG1Q92597 394 aaKnown RBP21.05■□□□□ 0.96
PSEN1-225ENST00000560005 HSFY1Q96LI6 401 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 OSBPL9Q96SU4 736 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 LGMNQ99538 433 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 ANAPC7Q9UJX3 599 aa21.05■□□□□ 0.96
PSEN1-225ENST00000560005 ARID1BQ8NFD5 2236 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-225ENST00000560005 SPTA1P02549 2419 aa21.04■□□□□ 0.96
PSEN1-225ENST00000560005 LRRC72A6NJI9 287 aa21.04■□□□□ 0.96
PSEN1-225ENST00000560005 SIGLEC16A6NMB1 481 aa21.04■□□□□ 0.96
PSEN1-225ENST00000560005 MID1O15344 667 aa21.04■□□□□ 0.96
PSEN1-225ENST00000560005 RNASEH2AO75792 299 aaKnown RBP21.04■□□□□ 0.96
PSEN1-225ENST00000560005 FTCDO95954 541 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms