RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PLD5Q8N7P1 536 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 OR52K2Q8NGK3 314 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 KIF18AQ8NI77 898 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 WFDC5Q8TCV5 224 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 TEKT4Q8WW24 435 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 C1orf54Q8WWF1 131 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 FGF14Q92915 247 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 NTAN1Q96AB6 310 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 ASB16Q96NS5 453 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 PRMT1Q99873 361 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 TRIM62Q9BVG3 475 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 CARD6Q9BX69 1037 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 TMPRSS13Q9BYE2 586 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 KLC2Q9H0B6 622 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 TASP1Q9H6P5 420 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 ARHGEF4Q9NR80 690 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 RAD18Q9NS91 495 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 RBM12Q9NTZ6 932 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 LMCD1Q9NZU5 365 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.37□□□□□ -1.55
SPG11-220ENST00000559933 CLEC4EQ9ULY5 219 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 ARHGAP26Q9UNA1 814 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 HBS1LQ9Y450 684 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 MRFAP1Q9Y605 127 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 ACTL7AQ9Y615 435 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 SAR1BQ9Y6B6 198 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 V9GYY5 206 aaPredicted RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 PKD1L2Q7Z442 2459 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 OTOL1A6NHN0 477 aaPredicted RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 HEPACAM2A8MVW5 462 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 C2CD4DB7Z1M9 353 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 PGRMC1O00264 195 aaKnown RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 ZNF197O14709 1029 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 DCLK1O15075 740 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 TRIM24O15164 1050 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 MBTPS2O43462 519 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 CST8O60676 142 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 TBL1XO60907 577 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 ZRANB2O95218 330 aaKnown RBP eCLIP5.36□□□□□ -1.55
SPG11-220ENST00000559933 FGF19O95750 216 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 C1RP00736 705 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 F9P00740 461 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 IL9P15248 144 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 DESP17661 470 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 ERCC2P18074 760 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 POU3F3P20264 500 aaPredicted RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 GLDCP23378 1020 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 EPHB2P29323 1055 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 KCNJ1P48048 391 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 PPP3CCP48454 512 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 CD97P48960 835 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 HARS2P49590 506 aaKnown RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 ITIH3Q06033 890 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 TNK2Q07912 1038 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 MESP2Q0VG99 397 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 SLC10A2Q12908 348 aaPredicted RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 KLF1Q13351 362 aaPredicted RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 PPP2R5DQ14738 602 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 ACAP1Q15027 740 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 POU4F3Q15319 338 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 LONRF2Q1L5Z9 754 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 SPRED3Q2MJR0 410 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 ODF2Q5BJF6 829 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 TFDP3Q5H9I0 405 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 CES5AQ6NT32 575 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 KLHDC10Q6PID8 442 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 VITQ6UXI7 678 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 TADA2BQ86TJ2 420 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 ZC3H18Q86VM9 953 aaKnown RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 NLRP14Q86W24 1093 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 C12orf40Q86WS4 652 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 TMEM25Q86YD3 366 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 SLC13A5Q86YT5 568 aaPredicted RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 SFTPA1Q8IWL2 248 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 KLHL7Q8IXQ5 586 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 RASGEF1CQ8N431 466 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 TAB3Q8N5C8 712 aaPredicted RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 ATP6V0D2Q8N8Y2 350 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 PRELID2Q8N945 189 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 NOA1Q8NC60 698 aaKnown RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 EXD1Q8NHP7 514 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 MAFAQ8NHW3 353 aaPredicted RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 FAM71BQ8TC56 605 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 SUSD6Q92537 303 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 FAF2Q96CS3 445 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 TBC1D31Q96DN5 1066 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 ERLEC1Q96DZ1 483 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 RBM41Q96IZ5 413 aaKnown RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 BTN2A3PQ96KV6 586 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 DMRTB1Q96MA1 342 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 RPRD1AQ96P16 312 aaPredicted RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 RNF157Q96PX1 679 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 CDK5RAP1Q96SZ6 601 aaKnown RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 FAM129BQ96TA1 746 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 OSBPL8Q9BZF1 889 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 CARD9Q9H257 536 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 EPC1Q9H2F5 836 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 EBF3Q9H4W6 596 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 NOL6Q9H6R4 1146 aaKnown RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 TDP1Q9NUW8 608 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms