RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ILVBLA1L0T0 632 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 RHOCP08134 193 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 CD70P32970 193 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 NDST2P52849 883 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 FAM193AP78312 1265 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 CBLBQ13191 982 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 CCDC25Q86WR0 208 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 CCDC117Q8IWD4 279 aaPredicted RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 TP53INP2Q8IXH6 220 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 NETO2Q8NC67 525 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 ALG14Q96F25 216 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 CELF6Q96J87 481 aaKnown RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 PWWP2AQ96N64 755 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 PHACTR1Q9C0D0 580 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 SLC39A8Q9C0K1 460 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 C8orf33Q9H7E9 229 aaPredicted RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 KIAA1522Q9P206 1035 aaPredicted RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 PIAS3Q9Y6X2 628 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 TRIOO75962 3097 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 A0A0D9SEW6 157 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 SHISA7A6NL88 538 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 SPECC1L-ADORA2AF8WAN1 911 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 PPP1R12AO14974 1030 aaPredicted RBP16.87■□□□□ 0.29
TPM1-219ENST00000559397 NCAM2O15394 837 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 RIPK2O43353 540 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 RAMP2O60895 175 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 VAV1P15498 845 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 MZF1P28698 734 aaPredicted RBP16.87■□□□□ 0.29
TPM1-219ENST00000559397 CTHP32929 405 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 SERPINB6P35237 376 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 CSKP41240 450 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 MAGEA6P43360 314 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 DGKGP49619 791 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 MESP2Q0VG99 397 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 ANKRD22Q5VYY1 191 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 ZNF783Q6ZMS7 281 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 RALGPS2Q86X27 583 aaPredicted RBP16.87■□□□□ 0.29
TPM1-219ENST00000559397 HTR3CQ8WXA8 447 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 ZBTB9Q96C00 473 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 BRD8Q9H0E9 1235 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 CDC42EP4Q9H3Q1 356 aaKnown RBP16.87■□□□□ 0.29
TPM1-219ENST00000559397 DEC1Q9P2X7 70 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 SLC27A6Q9Y2P4 619 aa16.87■□□□□ 0.29
TPM1-219ENST00000559397 GLULP15104 373 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 ACTN2P35609 894 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 ACVRL1P37023 503 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 PLK1P53350 603 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 OXCT1P55809 520 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 EIF3BP55884 814 aaKnown RBP16.86■□□□□ 0.29
TPM1-219ENST00000559397 YBEYP58557 167 aaPredicted RBP16.86■□□□□ 0.29
TPM1-219ENST00000559397 GNA12Q03113 381 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 ZNF844Q08AG5 666 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 GALNT2Q10471 571 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 SLC12A1Q13621 1099 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 KCNJ11Q14654 390 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 GEN1Q17RS7 908 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 SLC44A4Q53GD3 710 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 RNF219Q5W0B1 726 aaPredicted RBP16.86■□□□□ 0.29
TPM1-219ENST00000559397 HEATR6Q6AI08 1181 aaKnown RBP16.86■□□□□ 0.29
TPM1-219ENST00000559397 TXNDC11Q6PKC3 985 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 CCDC33Q8N5R6 958 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 OR7D4Q8NG98 312 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 LRRN4Q8WUT4 740 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 ARHGEF2Q92974 986 aaKnown RBP16.86■□□□□ 0.29
TPM1-219ENST00000559397 LGMNQ99538 433 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 FEM1AQ9BSK4 669 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 MAGEH1Q9H213 219 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 ABCB8Q9NUT2 735 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 GGA2Q9UJY4 613 aa16.86■□□□□ 0.29
TPM1-219ENST00000559397 INTS6Q9UL03 887 aaKnown RBP16.86■□□□□ 0.29
TPM1-219ENST00000559397 NYNRINQ9P2P1 1898 aaKnown RBP16.86■□□□□ 0.29
TPM1-219ENST00000559397 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.85■□□□□ 0.29
TPM1-219ENST00000559397 RASA4BC9J798 803 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 RASA4O43374 803 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 PABPC1P11940 636 aaKnown RBP16.85■□□□□ 0.29
TPM1-219ENST00000559397 MX2P20592 715 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 GALK1P51570 392 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 SLC29A2Q14542 456 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 POLD3Q15054 466 aaPredicted RBP16.85■□□□□ 0.29
TPM1-219ENST00000559397 PARP15Q460N3 678 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 UBAP2Q5T6F2 1119 aaKnown RBP16.85■□□□□ 0.29
TPM1-219ENST00000559397 DENND2CQ68D51 928 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 GRAMD4Q6IC98 578 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 UBALD2Q8IYN6 164 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 APCDD1Q8J025 514 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 CCDC110Q8TBZ0 833 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 HMCESQ96FZ2 354 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 PKNOX2Q96KN3 472 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 RBM15Q96T37 977 aaKnown RBP eCLIP16.85■□□□□ 0.292e-7■■□□□ 13.8
TPM1-219ENST00000559397 ACE2Q9BYF1 805 aaPredicted RBP16.85■□□□□ 0.29
TPM1-219ENST00000559397 FBRSL1Q9HCM7 1045 aaKnown RBP16.85■□□□□ 0.29
TPM1-219ENST00000559397 MUTYHQ9UIF7 546 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 A0A0A0MRY4 1105 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 TCRBV7S3A2A0A539 114 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 GOLGA8KD6RF30 607 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 ALOX15BO15296 676 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 TMEM63AO94886 807 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 TTC4O95801 387 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 CBX1P83916 185 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms