RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 FSBPO95073 299 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 IPO7O95373 1038 aaKnown RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 POP4O95707 220 aaKnown RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 CER1O95813 267 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 MT-CO1P00395 513 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 CYP1A2P05177 515 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 SRCP12931 536 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 VAV1P15498 845 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ENGP17813 658 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 CD27P26842 260 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 MAOBP27338 520 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 MIPP30301 263 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 CHRNA3P32297 505 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 SERPINB6P35237 376 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 NUDT1P36639 197 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 MAPK8P45983 427 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 HCAR3P49019 387 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 NDST2P52849 883 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 GALCP54803 685 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ADKP55263 362 aaKnown RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 C21orf59P57076 290 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 OGDHQ02218 1023 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 SLC14A1Q13336 389 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 GRM3Q14832 879 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 UAP1L1Q3KQV9 507 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 RAB6CQ53S08 254 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 INO80DQ53TQ3 878 aaPredicted RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 SLC45A4Q5BKX6 768 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ZFYVE27Q5T4F4 411 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 CFAP58Q5T655 872 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 STPG1Q5TH74 334 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 FAM72AQ5TYM5 149 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 MANEALQ5VSG8 457 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 PEAR1Q5VY43 1037 aaPredicted RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 KIAA0895LQ68EN5 471 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 TCEAL6Q6IPX3 200 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 FAM72DQ6L9T8 149 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 NEK5Q6P3R8 708 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 C22orf39Q6P5X5 142 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 FBXL19Q6PCT2 694 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 NCEH1Q6PIU2 408 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 SARM1Q6SZW1 724 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 DPY19L3Q6ZPD9 716 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 RFX8Q6ZV50 586 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 PRPF39Q86UA1 669 aaKnown RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 NLRP14Q86W24 1093 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 FAM72BQ86X60 149 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 SLC41A1Q8IVJ1 513 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 MAP7D3Q8IWC1 876 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 RHOT2Q8IXI1 618 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 PLPP6Q8IY26 295 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 UMODL1-AS1Q8N2C9 162 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 PYROXD2Q8N2H3 581 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 NIPA2Q8N8Q9 360 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 TMIEQ8NEW7 156 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 OR7D4Q8NG98 312 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 OR2AP1Q8NGE2 309 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 OR2A12Q8NGT7 310 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 OR2T34Q8NGX1 318 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 PIP4K2CQ8TBX8 421 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 NSMCE1Q8WV22 266 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 HSPH1Q92598 858 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ARHGEF2Q92974 986 aaKnown RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 TCEAL3Q969E4 200 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ISG20Q96AZ6 181 aaKnown RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 BIRC7Q96CA5 298 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ARHGEF26Q96DR7 871 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 LRIG1Q96JA1 1093 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 FAM129BQ96TA1 746 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 PSMB7Q99436 277 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 DNAJC7Q99615 494 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 HEPHQ9BQS7 1158 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 OSBPL1AQ9BXW6 950 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ACE2Q9BYF1 805 aaPredicted RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 RAB6CQ9H0N0 254 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 TNKS2Q9H2K2 1166 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 SMOC1Q9H4F8 434 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 MTG2Q9H4K7 406 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 SLC32A1Q9H598 525 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 NHEJ1Q9H9Q4 299 aaPredicted RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 PREBQ9HCU5 417 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 CD93Q9NPY3 652 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 AASDHPPTQ9NRN7 309 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.46□□□□□ -1.7
SNX1-205ENST00000559339 HAUS2Q9NVX0 235 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ARHGAP20Q9P2F6 1191 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 UVRAGQ9P2Y5 699 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 HECAQ9UBI9 543 aaPredicted RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 GON4LQ3T8J9 2241 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 FANCMQ8IYD8 2048 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ZNF292O60281 2723 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 KIAA1549LQ6ZVL6 1849 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 A0A1W2PPC4 97 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 GOLGA6L6A8MZA4 724 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 PATE3B3GLJ2 98 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 RASA4BC9J798 803 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 K7ERQ8 282 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 DFFAO00273 331 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 KRIT1O00522 736 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms