RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RALBP11234 206 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 FGF3P11487 239 aaPredicted RBP11.46□□□□□ -0.57
CLPX-204ENST00000559152 COL6A2P12110 1019 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 EZRP15311 586 aaKnown RBP11.46□□□□□ -0.57
CLPX-204ENST00000559152 VEGFBP49765 207 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 AQP5P55064 265 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 IRX4P78413 519 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 RING1Q06587 406 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 EFEMP1Q12805 493 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 PCLAFQ15004 111 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 MS4A13Q5J8X5 152 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 ARTNQ5T4W7 220 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 C14orf80Q86SX3 495 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 DBF4BQ8NFT6 615 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 VPS39Q96JC1 886 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 GPR22Q99680 433 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 BTBD10Q9BSF8 475 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 MCMBPQ9BTE3 642 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 FICDQ9BVA6 458 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 TBC1D10AQ9BXI6 508 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 IL1RAPL1Q9NZN1 696 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 MPP6Q9NZW5 540 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 TMEM216Q9P0N5 145 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 MARCH2Q9P0N8 246 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 TCAF1Q9Y4C2 921 aa11.46□□□□□ -0.57
CLPX-204ENST00000559152 FCHO1O14526 889 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 MT-CYBP00156 380 aaPredicted RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 ESRRAP11474 423 aaPredicted RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 GPR15P49685 360 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 USP46P62068 366 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 TNK2Q07912 1038 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 ILF2Q12905 390 aaKnown RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 MGAT5BQ3V5L5 792 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 PARP15Q460N3 678 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 PPM1JQ5JR12 505 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 MARC1Q5VT66 337 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 SDHAF4Q5VUM1 108 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 FUT10Q6P4F1 479 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 RANBP10Q6VN20 620 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 CLEC14AQ86T13 490 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 LONP2Q86WA8 852 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 ZNF683Q8IZ20 524 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 ARHGAP24Q8N264 748 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 ATAD1Q8NBU5 361 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 PTCD3Q96EY7 689 aaKnown RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 FAM167BQ9BTA0 163 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 GPR62Q9BZJ7 368 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 SP110Q9HB58 689 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 ARNT2Q9HBZ2 717 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 NDFIP2Q9NV92 336 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLPX-204ENST00000559152 HEATR9A2RTY3 570 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 MTMR11A4FU01 709 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 DRGXA6NNA5 263 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 TMEM114B3SHH9 223 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 NBNO60934 754 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 SIN3BO75182 1162 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 PARNO95453 639 aaKnown RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 C2P06681 752 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 SERPINA6P08185 405 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 HAPLN1P10915 354 aaPredicted RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 MYL4P12829 197 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 KCNA4P22459 653 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 YBEYP58557 167 aaPredicted RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 TAF10Q12962 218 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 THOC5Q13769 683 aaKnown RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 C10orf120Q5SQS8 335 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 WASHC2DQ5SRD0 308 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 DENND5AQ6IQ26 1287 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 CMC1Q7Z7K0 106 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 ZC3HC1Q86WB0 502 aaKnown RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 NPAS4Q8IUM7 802 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 C10orf107Q8IVU9 208 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 FAM126BQ8IXS8 530 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 CALML6Q8TD86 181 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 SH3TC2Q8TF17 1288 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 RILPQ96NA2 401 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 RANBP9Q96S59 729 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 SEPT5Q99719 369 aaPredicted RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 NMRAL1Q9HBL8 299 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 CD248Q9HCU0 757 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 MARCH5Q9NX47 278 aa11.45□□□□□ -0.58
CLPX-204ENST00000559152 MAGED2Q9UNF1 606 aaPredicted RBP11.45□□□□□ -0.58
CLPX-204ENST00000559152 GYG2O15488 501 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 TBC1D4O60343 1298 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 PMPCBO75439 489 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 TOP3BO95985 862 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 IGLV3-27P01718 113 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 MAPKAPK2P49137 400 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 SLC11A1P49279 550 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 HARS2P49590 506 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 ARPP19P56211 112 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 ABCE1P61221 599 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 SLC12A1Q13621 1099 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 LAMB3Q13751 1172 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 POU6F1Q14863 301 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 KIAA0930Q6ICG6 404 aaPredicted RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 ZCCHC23Q6ZST2 131 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 KIAA0408Q6ZU52 694 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 RAPH1Q70E73 1250 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms