RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CXCR5P32302 372 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 ETFBP38117 255 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 GARSP41250 739 aaKnown RBP11.1□□□□□ -0.63
TPM1-217ENST00000559108 MAGEA9P43362 315 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 FNTBP49356 437 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 CSTF1Q05048 431 aaKnown RBP11.1□□□□□ -0.63
TPM1-217ENST00000559108 SULT2A1Q06520 285 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 ZBTB17Q13105 803 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 SIX1Q15475 284 aaPredicted RBP11.1□□□□□ -0.63
TPM1-217ENST00000559108 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
TPM1-217ENST00000559108 PREPLQ4J6C6 727 aaPredicted RBP11.1□□□□□ -0.63
TPM1-217ENST00000559108 HEATR6Q6AI08 1181 aaKnown RBP11.1□□□□□ -0.63
TPM1-217ENST00000559108 DPY19L3Q6ZPD9 716 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 FAM160A2Q8N612 972 aaPredicted RBP11.1□□□□□ -0.63
TPM1-217ENST00000559108 ATP11CQ8NB49 1132 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 KDM1BQ8NB78 822 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 UCMAQ8WVF2 138 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 RBM41Q96IZ5 413 aaKnown RBP11.1□□□□□ -0.63
TPM1-217ENST00000559108 CEP41Q9BYV8 373 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 TPSD1Q9BZJ3 242 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 TM6SF2Q9BZW4 377 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 SMARCAL1Q9NZC9 954 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 SERGEFQ9UGK8 458 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 SLC25A13Q9UJS0 675 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 PLA2G4CQ9UP65 541 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 MYLKQ15746 1914 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 PLXNA2O75051 1894 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 ARHGAP42A6NI28 874 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 H0Y858 1186 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 ZSCAN12O43309 604 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 LAMTOR5O43504 91 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 SP9P0CG40 484 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 CCR3P51677 355 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 RPS14P62263 151 aaKnown RBP11.09□□□□□ -0.63
TPM1-217ENST00000559108 IL10RBQ08334 325 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 PRKD1Q15139 912 aaPredicted RBP11.09□□□□□ -0.63
TPM1-217ENST00000559108 RPS6KA1Q15418 735 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 POM121L1PQ3SYA9 428 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 ZNF354CQ86Y25 554 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 ATPAF2Q8N5M1 289 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 LZTR1Q8N653 840 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 CNTD1Q8N815 330 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 TSEN2Q8NCE0 465 aaKnown RBP11.09□□□□□ -0.63
TPM1-217ENST00000559108 TSTD1Q8NFU3 115 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 TRIM58Q8NG06 486 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 ACTL9Q8TC94 416 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 COG1Q8WTW3 980 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 HMGB4Q8WW32 186 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 IER2Q9BTL4 223 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 RSPH9Q9H1X1 276 aaPredicted RBP11.09□□□□□ -0.63
TPM1-217ENST00000559108 SP110Q9HB58 689 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 UBA2Q9UBT2 640 aaPredicted RBP11.09□□□□□ -0.63
TPM1-217ENST00000559108 INVSQ9Y283 1065 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM1-217ENST00000559108 WASF2Q9Y6W5 498 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 ABCA7Q8IZY2 2146 aa11.09□□□□□ -0.63
TPM1-217ENST00000559108 CACNA1HO95180 2353 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 EDDM13A0A1B0GTR0 161 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 KCNK1O00180 336 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 KCNK3O14649 394 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 BNIP3LO60238 219 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 ATG13O75143 517 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 APBB3O95704 486 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 HLA-DQB2P05538 268 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 BCKDHBP21953 392 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 TGM2P21980 687 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 SERPINB6P35237 376 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 CLCN6P51797 869 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 CCNHP51946 323 aaPredicted RBP11.08□□□□□ -0.64
TPM1-217ENST00000559108 DGKEP52429 567 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 COPS2P61201 443 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 MAXP61244 160 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 OTUD4Q01804 1114 aaKnown RBP11.08□□□□□ -0.64
TPM1-217ENST00000559108 PPIDQ08752 370 aaKnown RBP11.08□□□□□ -0.64
TPM1-217ENST00000559108 NOMO1Q15155 1222 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 MAP7D1Q3KQU3 841 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 ACCSLQ4AC99 568 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 RETSATQ6NUM9 610 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 TRMT11Q7Z4G4 463 aaKnown RBP11.08□□□□□ -0.64
TPM1-217ENST00000559108 ADAT2Q7Z6V5 191 aaKnown RBP11.08□□□□□ -0.64
TPM1-217ENST00000559108 ZSWIM9Q86XI8 627 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 MMAAQ8IVH4 418 aaKnown RBP11.08□□□□□ -0.64
TPM1-217ENST00000559108 AADATQ8N5Z0 425 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 TEX26Q8N6G2 289 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 OR2T3Q8NH03 318 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.08□□□□□ -0.64
TPM1-217ENST00000559108 RLN3Q8WXF3 142 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 ATG4AQ8WYN0 398 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 MAML1Q92585 1016 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 ARRDC3Q96B67 414 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 HDAC11Q96DB2 347 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 MS4A14Q96JA4 679 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 TSGA13Q96PP4 275 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 ALS2CR12Q96Q35 445 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 MBD1Q9UIS9 605 aaPredicted RBP11.08□□□□□ -0.64
TPM1-217ENST00000559108 PPM1HQ9ULR3 514 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 SLC8A2Q9UPR5 921 aa11.08□□□□□ -0.64
TPM1-217ENST00000559108 R4GN57 208 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms