RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SLC25A13Q9UJS0 675 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 PPP2R2CQ9Y2T4 447 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 PCDHA3Q9Y5H8 950 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 WASF2Q9Y6W5 498 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 THADAQ6YHU6 1953 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 FRYLO94915 3013 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 DOCK9Q9BZ29 2069 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 hCG_1818297A0A087WSY0 165 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 TARSL2A2RTX5 802 aaKnown RBP11.65□□□□□ -0.54
SNX1-204ENST00000559061 USP27XA6NNY8 438 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 INSIG1O15503 277 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 KRT10P13645 584 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 PECAM1P16284 738 aaPredicted RBP11.65□□□□□ -0.54
SNX1-204ENST00000559061 GKP32189 559 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 DRD3P35462 400 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 ETFBP38117 255 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 TPMTP51580 245 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 CLCN6P51797 869 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 KIF5AQ12840 1032 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 STARD3Q14849 445 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 ATXN7L2Q5T6C5 722 aaPredicted RBP11.65□□□□□ -0.54
SNX1-204ENST00000559061 SDE2Q6IQ49 451 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 DPY19L3Q6ZPD9 716 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 METTL3Q86U44 580 aaKnown RBP11.65□□□□□ -0.54
SNX1-204ENST00000559061 KBTBD6Q86V97 674 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 MMAAQ8IVH4 418 aaKnown RBP11.65□□□□□ -0.54
SNX1-204ENST00000559061 ATP11CQ8NB49 1132 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 OR6K2Q8NGY2 324 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 OLFM3Q96PB7 478 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 TM6SF2Q9BZW4 377 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 CEP44Q9C0F1 390 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 DUSP15Q9H1R2 295 aaPredicted RBP11.65□□□□□ -0.54
SNX1-204ENST00000559061 PRDM16Q9HAZ2 1276 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 SUN2Q9UH99 717 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 PPM1HQ9ULR3 514 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 PYCARDQ9ULZ3 195 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 OTOGLQ3ZCN5 2332 aa11.65□□□□□ -0.54
SNX1-204ENST00000559061 PLXNA2O75051 1894 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 DFFAO00273 331 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 MCF2LO15068 1137 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 MID1O15344 667 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 SPINT1O43278 529 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 DAPK3O43293 454 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 SYNCRIPO60506 623 aaKnown RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 RPP40O75818 363 aaKnown RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 CCDC175P0C221 793 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 PSMD8P48556 350 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 ST8SIA6P61647 398 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 SLC10A7Q0GE19 358 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 ELAVL3Q14576 367 aaKnown RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 CST6Q15828 149 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 PLK5Q496M5 336 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 RETSATQ6NUM9 610 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 KIAA1324Q6UXG2 1013 aaKnown RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 ASCL5Q7RTU5 278 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 LZTR1Q8N653 840 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 PCDH20Q8N6Y1 951 aaKnown RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 KIAA1524Q8TCG1 905 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 ISG20Q96AZ6 181 aaKnown RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 ARRDC3Q96B67 414 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 HES6Q96HZ4 224 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 EXOC2Q96KP1 924 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 PABPC3Q9H361 631 aaKnown RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 LZTFL1Q9NQ48 299 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 ITM2CQ9NQX7 267 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 DDX56Q9NY93 547 aaKnown RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 BCCIPQ9P287 314 aaKnown RBP eCLIP11.64□□□□□ -0.55
SNX1-204ENST00000559061 SAE1Q9UBE0 346 aaPredicted RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 IPO11Q9UI26 975 aaKnown RBP11.64□□□□□ -0.55
SNX1-204ENST00000559061 GUCA1BQ9UMX6 200 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 CYP8B1Q9UNU6 501 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 SLCO1B1Q9Y6L6 691 aa11.64□□□□□ -0.55
SNX1-204ENST00000559061 TTC24A2A3L6 582 aaPredicted RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 ARHGAP42A6NI28 874 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 ALDH1A2O94788 518 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 PYGMP11217 842 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 CR2P20023 1033 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 GARSP41250 739 aaKnown RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 CCNHP51946 323 aaPredicted RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 NRLP54845 237 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 TAS2R38P59533 333 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 IL10RBQ08334 325 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 SLC20A2Q08357 652 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 LPAL2Q16609 132 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 POM121L1PQ3SYA9 428 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 ACCSLQ4AC99 568 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 INO80DQ53TQ3 878 aaPredicted RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 CARD16Q5EG05 197 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 PMS2CLQ68D20 193 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 ZNF776Q68DI1 518 aaPredicted RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 B4GALNT4Q76KP1 1039 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 SLC41A1Q8IVJ1 513 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 RNF10Q8N5U6 811 aaKnown RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 TSEN2Q8NCE0 465 aaKnown RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 EXD1Q8NHP7 514 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 MAML1Q92585 1016 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 SIPA1Q96FS4 1042 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 ZC3H10Q96K80 434 aaKnown RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 CALR3Q96L12 384 aaKnown RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 FBRSQ9HAH7 460 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms