RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 CYP2U1Q7Z449 544 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 ATP11CQ8NB49 1132 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 SLC35G2Q8TBE7 412 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 ZNF564Q8TBZ8 553 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 LRRN4Q8WUT4 740 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 FUBP1Q96AE4 644 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 BIRC7Q96CA5 298 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 MAGEH1Q9H213 219 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 ZWILCHQ9H900 591 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 KLHL11Q9NVR0 708 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 FBXL12Q9NXK8 326 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 LHX3Q9UBR4 397 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 HYOU1Q9Y4L1 999 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 SCINQ9Y6U3 715 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 FOXD2O60548 495 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 PROSCO94903 275 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 WNT1P04628 370 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 ITIH2P19823 946 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 ADPRHP54922 357 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 OXCT1P55809 520 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 ELAVL3Q14576 367 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 POLD3Q15054 466 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 TCEAL1Q15170 157 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 ACCSLQ4AC99 568 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 ATXN7L2Q5T6C5 722 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 LYSMD4Q5XG99 296 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 SYT12Q8IV01 421 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 HDDC3Q8N4P3 179 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 PQLC3Q8N755 202 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 OR6K2Q8NGY2 324 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 PIP4K2CQ8TBX8 421 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 RAPGEF5Q92565 580 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 CSPG4P5Q96PW8 444 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 C2orf49Q9BVC5 232 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 FBRSQ9HAH7 460 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 MRPL47Q9HD33 250 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 DUSP10Q9Y6W6 482 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 TRPM6Q9BX84 2022 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 PCNX2A6NKB5 2137 aa12.89□□□□□ -0.35
RABGGTA-207ENST00000558936 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 TTC24A2A3L6 582 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 EEF2KO00418 725 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 RAMP2O60895 175 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 IL1BP01584 269 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 H2AFZP0C0S5 128 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 OXTRP30559 389 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 CHRNA3P32297 505 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 HCAR3P49019 387 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 PAPOLAP51003 745 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 TPI1P60174 286 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 ZBTB16Q05516 673 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 SLC10A2Q12908 348 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 DPYSL3Q14195 570 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 FGL2Q14314 439 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 ACAP1Q15027 740 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 PPP6R3Q5H9R7 873 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 IL31Q6EBC2 164 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 SLC23A3Q6PIS1 610 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 NCEH1Q6PIU2 408 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 KDM7AQ6ZMT4 941 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 USP30Q70CQ3 517 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 H2AFVQ71UI9 128 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 ZSWIM9Q86XI8 627 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 PGBD5Q8N414 524 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 CADM4Q8NFZ8 388 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 PCDH19Q8TAB3 1148 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 NETO1Q8TDF5 533 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 HSPH1Q92598 858 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 TRIM11Q96F44 468 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 TM6SF2Q9BZW4 377 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 RETREG1Q9H6L5 497 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 IP6K2Q9UHH9 426 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 EIF2B4Q9UI10 523 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 GGT7Q9UJ14 662 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 SLC25A13Q9UJS0 675 aa12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 ZFR2Q9UPR6 939 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-207ENST00000558936 CACNA1AO00555 2505 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 AKR1B10O60218 316 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 BNIP3LO60238 219 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 PRPSAP2O60256 369 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 BUB1BO60566 1050 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 NDUFS2O75306 463 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 LEFTY1O75610 366 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 RNF8O76064 485 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 TMCC1O94876 653 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 SEMA4FO95754 770 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 DNTTP04053 509 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 TPM3P06753 285 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 ACADMP11310 421 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 C5AR1P21730 350 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 ABL2P42684 1182 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 CCNHP51946 323 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 KRT83P78385 493 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 ADCY2Q08462 1091 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 AASDHQ4L235 1098 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms