RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 RNGTTO60942 597 aaKnown RBP12.78□□□□□ -0.36
SMAD3-208ENST00000558827 ZNF821O75541 412 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-208ENST00000558827 CER1O95813 267 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 CD160O95971 181 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 PRLRP16471 622 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 RHOQP17081 205 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 PSMA2P25787 234 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 RECQLP46063 649 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-208ENST00000558827 UBASH3AP57075 661 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 TAS2R38P59533 333 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 MAMLD1Q13495 774 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 TRIP6Q15654 476 aaKnown RBP12.78□□□□□ -0.36
SMAD3-208ENST00000558827 CA9Q16790 459 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 EFHC2Q5JST6 749 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 PPP1R15BQ5SWA1 713 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 MANEALQ5VSG8 457 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 AGBL4Q5VU57 503 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 RETSATQ6NUM9 610 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 TMC6Q7Z403 805 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 NLRP14Q86W24 1093 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 GATAD2AQ86YP4 633 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 CHCHD4Q8N4Q1 142 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 RHBDD1Q8TEB9 315 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 ARHGEF2Q92974 986 aaKnown RBP12.78□□□□□ -0.36
SMAD3-208ENST00000558827 CNPY3Q9BT09 278 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.78□□□□□ -0.36
SMAD3-208ENST00000558827 ZDHHC5Q9C0B5 715 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 ZDHHC6Q9H6R6 413 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 FZD3Q9NPG1 666 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 PPARGC1AQ9UBK2 798 aaKnown RBP12.78□□□□□ -0.36
SMAD3-208ENST00000558827 FZD10Q9ULW2 581 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 NEU3Q9UQ49 428 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 CACNA1BQ00975 2339 aa12.77□□□□□ -0.36
SMAD3-208ENST00000558827 A0A1W2PQC6 194 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 GOLGA6L19H0YKK7 550 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 LEFTY1O75610 366 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 PCDH8O95206 1070 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 EPHB2P29323 1055 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 CTSKP43235 329 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 SERPINH1P50454 418 aaKnown RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 VASPP50552 380 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 GSCP56915 257 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 RACK1P63244 317 aaKnown RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 POLD3Q15054 466 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 ZSCAN23Q3MJ62 389 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 CARD16Q5EG05 197 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 ATXN7L2Q5T6C5 722 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 PRPF39Q86UA1 669 aaKnown RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 ZNF653Q96CK0 615 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 SCNM1Q9BWG6 230 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 ACE2Q9BYF1 805 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 TTYH3Q9C0H2 523 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 DHX35Q9H5Z1 703 aaKnown RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 NOL6Q9H6R4 1146 aaKnown RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 DYRK4Q9NR20 520 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 TMEM248Q9NWD8 314 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 AIPL1Q9NZN9 384 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 IFNKQ9P0W0 207 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 CNOT8Q9UFF9 292 aaKnown RBP12.77□□□□□ -0.37
SMAD3-208ENST00000558827 IL36AQ9UHA7 158 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 WASF2Q9Y6W5 498 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 AKAP13Q12802 2813 aa12.77□□□□□ -0.37
SMAD3-208ENST00000558827 TDRD6O60522 2096 aaKnown RBP12.76□□□□□ -0.37
SMAD3-208ENST00000558827 A0A1W2PQU0 124 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 A0A1W2PR77 199 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 PLRG1O43660 514 aaKnown RBP12.76□□□□□ -0.37
SMAD3-208ENST00000558827 BUB1O43683 1085 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 RAMP2O60895 175 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 CD38P28907 300 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 GRIA4P48058 902 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 CCR5P51681 352 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 CCNHP51946 323 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-208ENST00000558827 TPM4P67936 248 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 NRG1Q02297 640 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-208ENST00000558827 TDRD12Q587J7 1177 aaKnown RBP12.76□□□□□ -0.37
SMAD3-208ENST00000558827 LRRC73Q5JTD7 316 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 PIP5KL1Q5T9C9 394 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 IL27RAQ6UWB1 636 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 SLCO6A1Q86UG4 719 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 MARCH9Q86YJ5 346 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 ARFGAP1Q8N6T3 406 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 NTAN1Q96AB6 310 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 HMCESQ96FZ2 354 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 CELF6Q96J87 481 aaKnown RBP12.76□□□□□ -0.37
SMAD3-208ENST00000558827 CCDC114Q96M63 670 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 PEBP4Q96S96 227 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 HEPHQ9BQS7 1158 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 PARVAQ9NVD7 372 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 ARHGAP20Q9P2F6 1191 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 HECAQ9UBI9 543 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-208ENST00000558827 KLK13Q9UKR3 277 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 MYO6Q9UM54 1294 aa12.76□□□□□ -0.37
SMAD3-208ENST00000558827 TP53BP1Q12888 1972 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-208ENST00000558827 GOLGA4Q13439 2230 aaKnown RBP12.76□□□□□ -0.37
SMAD3-208ENST00000558827 UPK3BL1B0FP48 263 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 C1QTNF9BB2RNN3 333 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 UPK3BL2E5RIL1 263 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 KRIT1O00522 736 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 VILLO15195 856 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 ALOX15BO15296 676 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms