RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 DESI2Q9BSY9 194 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 TM6SF2Q9BZW4 377 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 CEP44Q9C0F1 390 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 TNKS2Q9H2K2 1166 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 PABPC3Q9H361 631 aaKnown RBP12.6□□□□□ -0.39
SMAD3-205ENST00000558428 ETNK2Q9NVF9 386 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 WSB2Q9NYS7 404 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-205ENST00000558428 SALL4Q9UJQ4 1053 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 SCML1Q9UN30 329 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 MFHAS1Q9Y4C4 1052 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 A0A1W2PP55 124 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 LRRD1A4D1F6 860 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 C1QTNF3-AMACRE9PGA6 284 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 MCF2LO15068 1137 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 ALOX15BO15296 676 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 PJA2O43164 708 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 ADH1BP00325 375 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 IGLV3-19P01714 112 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 RETP07949 1114 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 C7P10643 843 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 KDELR1P24390 212 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 IL4RP24394 825 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 OXTRP30559 389 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 SLC8A1P32418 973 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 SERPINB6P35237 376 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 DHPSP49366 369 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-205ENST00000558428 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
SMAD3-205ENST00000558428 ODF2Q5BJF6 829 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 AFMIDQ63HM1 303 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 DAAM2Q86T65 1068 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 RHOT1Q8IXI2 618 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 TXLNBQ8N3L3 684 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 DCLK2Q8N568 766 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 DEFB119Q8N690 84 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 TPCN2Q8NHX9 752 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 CASKIN2Q8WXE0 1202 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 RAPGEF5Q92565 580 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 ISG20Q96AZ6 181 aaKnown RBP12.59□□□□□ -0.39
SMAD3-205ENST00000558428 LOXL4Q96JB6 756 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 OMDQ99983 421 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 ZNF670Q9BS34 389 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 LACRTQ9GZZ8 138 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 GOLPH3Q9H4A6 298 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 SP110Q9HB58 689 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 FBXL12Q9NXK8 326 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 UBA2Q9UBT2 640 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-205ENST00000558428 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 ALG6Q9Y672 507 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 DUSP10Q9Y6W6 482 aa12.59□□□□□ -0.39
SMAD3-205ENST00000558428 TNRC6BQ9UPQ9 1833 aaKnown RBP12.58□□□□□ -0.4
SMAD3-205ENST00000558428 GVINP1Q7Z2Y8 2422 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 BTNL10A8MVZ5 291 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 J3KR12 359 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 ARHGAP6O43182 974 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 PRAMEF11O60813 436 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 ZNF821O75541 412 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-205ENST00000558428 TMCC1O94876 653 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 EPN2O95208 641 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 KRT1P04264 644 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 CTSLP07711 333 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 C5AR1P21730 350 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 CHRNA3P32297 505 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 KIF5AQ12840 1032 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 POM121L1PQ3SYA9 428 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 INO80DQ53TQ3 878 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-205ENST00000558428 ANKRD20A8PQ5CZ79 823 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 CARD16Q5EG05 197 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 LRRC38Q5VT99 294 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 FAM46CQ5VWP2 391 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 C11orf63Q6NUN7 778 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 DPY19L3Q6ZPD9 716 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 USP30Q70CQ3 517 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 ARMCX6Q7L4S7 300 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 TP53INP2Q8IXH6 220 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 RYBPQ8N488 228 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-205ENST00000558428 CHST14Q8NCH0 376 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 CCDC112Q8NEF3 446 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 PCDH19Q8TAB3 1148 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 PIP4K2CQ8TBX8 421 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 CALR3Q96L12 384 aaKnown RBP12.58□□□□□ -0.4
SMAD3-205ENST00000558428 GPR174Q9BXC1 333 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 BTBD1Q9H0C5 482 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 PDFQ9HBH1 243 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 DDX56Q9NY93 547 aaKnown RBP12.58□□□□□ -0.4
SMAD3-205ENST00000558428 SERGEFQ9UGK8 458 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 IL36AQ9UHA7 158 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 SARDHQ9UL12 918 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 PPM1HQ9ULR3 514 aa12.58□□□□□ -0.4
SMAD3-205ENST00000558428 PSTPIP1O43586 416 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 MFSD11O43934 449 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 RNASEH2AO75792 299 aaKnown RBP12.57□□□□□ -0.4
SMAD3-205ENST00000558428 GSRP00390 522 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 PRNPP04156 253 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 ACSL1P33121 698 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 PTGER3P43115 390 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 CCNHP51946 323 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-205ENST00000558428 METAP1P53582 386 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 RHOAP61586 193 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 SNRPD1P62314 119 aaKnown RBP12.57□□□□□ -0.4
SMAD3-205ENST00000558428 CREB5Q02930 508 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms