RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 DCDC2BA2VCK2 349 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 GOLGA8SH3BPF8 625 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 SLC30A4O14863 429 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 AGTP01019 485 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 SDHBP21912 280 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 HLA-FP30511 346 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 DHPSP49366 369 aaPredicted RBP10.56□□□□□ -0.72
TPM1-212ENST00000558347 MAGOHP61326 146 aaKnown RBP10.56□□□□□ -0.72
TPM1-212ENST00000558347 RPL7AP62424 266 aaKnown RBP10.56□□□□□ -0.72
TPM1-212ENST00000558347 PITX1P78337 314 aaPredicted RBP10.56□□□□□ -0.72
TPM1-212ENST00000558347 FOXK2Q01167 660 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 RING1Q06587 406 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 ENPP2Q13822 863 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 ACAP1Q15027 740 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 TAF5Q15542 800 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 EFHC1Q5JVL4 640 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 FAM102AQ5T9C2 384 aaPredicted RBP10.56□□□□□ -0.72
TPM1-212ENST00000558347 PIK3R6Q5UE93 754 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 NUGGCQ68CJ6 796 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 NADSYN1Q6IA69 706 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 SDE2Q6IQ49 451 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 ARMCX6Q7L4S7 300 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 PHLDB2Q86SQ0 1253 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 TAC4Q86UU9 113 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 PACS2Q86VP3 889 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 UNC45BQ8IWX7 931 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 TMEFF1Q8IYR6 380 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 CNPY4Q8N129 248 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 WFDC5Q8TCV5 224 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 TMA16Q96EY4 203 aaKnown RBP10.56□□□□□ -0.72
TPM1-212ENST00000558347 MYEOVQ96EZ4 313 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 SLC39A13Q96H72 371 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 SPACA7Q96KW9 195 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 PRICKLE1Q96MT3 831 aaPredicted RBP10.56□□□□□ -0.72
TPM1-212ENST00000558347 SERPINB11Q96P15 392 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 MCEEQ96PE7 176 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 SLC2A11Q9BYW1 496 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 ROPN1BQ9BZX4 212 aaPredicted RBP10.56□□□□□ -0.72
TPM1-212ENST00000558347 TRIM7Q9C029 511 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 LRRC19Q9H756 370 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 ROPN1Q9HAT0 212 aaPredicted RBP10.56□□□□□ -0.72
TPM1-212ENST00000558347 POPDC2Q9HBU9 364 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 CD93Q9NPY3 652 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 ELOVL2Q9NXB9 296 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 WHRNQ9P202 907 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 ATP8A1Q9Y2Q0 1164 aa10.56□□□□□ -0.72
TPM1-212ENST00000558347 CEP192Q8TEP8 1941 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 PATE3B3GLJ2 98 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 SPOPO43791 374 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 FOXD2O60548 495 aaPredicted RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 TBL1XO60907 577 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 GJB6O95452 261 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 RFC1P35251 1148 aaPredicted RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 PTGER3P43115 390 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 SLC11A2P49281 568 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 PLTPP55058 493 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 YWHAZP63104 245 aaKnown RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 OGDHQ02218 1023 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 ZNF252P-AS1Q0IIN9 211 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 PIGHQ14442 188 aaPredicted RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 ZNF234Q14588 700 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 EIF4HQ15056 248 aaKnown RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 SIX1Q15475 284 aaPredicted RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 FUT11Q495W5 492 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 RNF43Q68DV7 783 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 CCDC137Q6PK04 289 aaKnown RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 TRMT10CQ7L0Y3 403 aaKnown RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 BEND5Q7L4P6 421 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 CYP2U1Q7Z449 544 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 JOSD2Q8TAC2 188 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 ART4Q93070 314 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 AZIN2Q96A70 460 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 BTBD6Q96KE9 485 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 MRGPRX1Q96LB2 322 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 CIPCQ9C0C6 399 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 CCDC134Q9H6E4 229 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 METTL5Q9NRN9 209 aaKnown RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 HOMER3Q9NSC5 361 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 ABCB8Q9NUT2 735 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 XPO7Q9UIA9 1087 aaKnown RBP10.55□□□□□ -0.72
TPM1-212ENST00000558347 CYP8B1Q9UNU6 501 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 TLR6Q9Y2C9 796 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 SNX24Q9Y343 169 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 CKAP5Q14008 2032 aa10.55□□□□□ -0.72
TPM1-212ENST00000558347 IGHV1OR15-9A0A0B4J2B8 117 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 C2CD4BA6NLJ0 364 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 TMEM110-MUSTN1A8MSY1 372 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 CAPN9O14815 690 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 IRAK2O43187 625 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 MAP3K13O43283 966 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 MOCS2O96007 188 aaPredicted RBP10.54□□□□□ -0.72
TPM1-212ENST00000558347 IGLV3-25P01717 112 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 PYGMP11217 842 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 GPD1P21695 349 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 PRKCHP24723 683 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 MMP13P45452 471 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 RPL21P46778 160 aaKnown RBP10.54□□□□□ -0.72
TPM1-212ENST00000558347 LIG3P49916 1009 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 ZNF143P52747 638 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms