RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TGFB3P10600 412 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 YWHAQP27348 245 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 PPP3CCP48454 512 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 PAPOLAP51003 745 aaKnown RBP3.63□□□□□ -1.83
SPG11-206ENST00000558093 CDH12P55289 794 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 ZP1P60852 638 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 IL13RA2Q14627 380 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 CTXN3Q4LDR2 81 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 SYTL3Q4VX76 610 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 FSCBQ5H9T9 825 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 FNBP1LQ5T0N5 605 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 TMEM71Q6P5X7 295 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 SERPINA11Q86U17 422 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 FTSJ3Q8IY81 847 aaKnown RBP3.63□□□□□ -1.83
SPG11-206ENST00000558093 HDAC7Q8WUI4 952 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 SLC35F5Q8WV83 523 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 RILPL2Q969X0 211 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 SDCCAG3Q96C92 435 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 APOLD1Q96LR9 279 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 GFM1Q96RP9 751 aaKnown RBP3.63□□□□□ -1.83
SPG11-206ENST00000558093 HERC2P3Q9BVR0 1158 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 SEZ6LQ9BYH1 1024 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 CTDSP1Q9GZU7 261 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 KLHL31Q9H511 634 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 PTPRHQ9HD43 1115 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 WWOXQ9NZC7 414 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 ZNF580Q9UK33 172 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 FEM1BQ9UK73 627 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 ICKQ9UPZ9 632 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 OSGIN2Q9Y236 505 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 SRPRBQ9Y5M8 271 aaKnown RBP3.63□□□□□ -1.83
SPG11-206ENST00000558093 OR6C68A6NDL8 312 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 DDTLA6NHG4 134 aaPredicted RBP3.62□□□□□ -1.83
SPG11-206ENST00000558093 INAFM1C9JVW0 142 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 EYA2O00167 538 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 VWA5AO00534 786 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 FAM155BO75949 473 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 CBSLP0DN79 551 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 ARSAP15289 507 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 CCKBRP32239 447 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 CBSP35520 551 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 PCYT1AP49585 367 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 MVDP53602 400 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 ZXDBP98169 803 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 GPS2Q13227 327 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 ZNF585BQ52M93 769 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 MEPCEQ7L2J0 689 aaKnown RBP3.62□□□□□ -1.83
SPG11-206ENST00000558093 MOGAT3Q86VF5 341 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 IQCF1Q8N6M8 205 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 MIGA1Q8NAN2 632 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 ATOH1Q92858 354 aaPredicted RBP3.62□□□□□ -1.83
SPG11-206ENST00000558093 NEUROG1Q92886 237 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 MED30Q96HR3 178 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 URB1-AS1Q96HZ7 61 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 PPP1R10Q96QC0 940 aaKnown RBP3.62□□□□□ -1.83
SPG11-206ENST00000558093 TWSG1Q9GZX9 223 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 LHPPQ9H008 270 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 NOD2Q9HC29 1040 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 SEL1LQ9UBV2 794 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 WNT16Q9UBV4 365 aa3.62□□□□□ -1.83
SPG11-206ENST00000558093 TRIP12Q14669 1992 aaPredicted RBP3.62□□□□□ -1.83
SPG11-206ENST00000558093 A0A096LPK6 155 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 TARSL2A2RTX5 802 aaKnown RBP3.61□□□□□ -1.83
SPG11-206ENST00000558093 HSPB6O14558 160 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 CLDN7O95471 211 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 LCATP04180 440 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 PRSS2P07478 247 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 ACAA1P09110 424 aaPredicted RBP3.61□□□□□ -1.83
SPG11-206ENST00000558093 HOXC6P09630 235 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 WEE2P0C1S8 567 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 DHRS4L1P0CG22 281 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 ENO3P13929 434 aaPredicted RBP3.61□□□□□ -1.83
SPG11-206ENST00000558093 HOXD3P31249 432 aaPredicted RBP3.61□□□□□ -1.83
SPG11-206ENST00000558093 GJC1P36383 396 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 DPP6P42658 865 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 EGR4Q05215 589 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 TRAF1Q13077 416 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 ANKRD1Q15327 319 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 DUSP6Q16828 381 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 Q6ZSV7 163 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 TRILQ7L0X0 811 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 TMC8Q8IU68 726 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 ADHFE1Q8IWW8 467 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 ZDHHC23Q8IYP9 409 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 PRR26Q8N8Z3 221 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 SPPL3Q8TCT6 385 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 TBC1D22AQ8WUA7 517 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 NPLQ9BXD5 320 aaPredicted RBP3.61□□□□□ -1.83
SPG11-206ENST00000558093 GRHL1Q9NZI5 618 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 FBXO40Q9UH90 709 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 DNAJC16Q9Y2G8 782 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 GDAQ9Y2T3 454 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 MORC2Q9Y6X9 1032 aaPredicted RBP3.61□□□□□ -1.83
SPG11-206ENST00000558093 MST1RQ04912 1400 aa3.61□□□□□ -1.83
SPG11-206ENST00000558093 B9A039 149 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 I6L893 689 aaPredicted RBP3.6□□□□□ -1.83
SPG11-206ENST00000558093 PEX12O00623 359 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 ASAP2O43150 1006 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 PTPN9P43378 593 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms