RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 RSPH9Q9H1X1 276 aaPredicted RBP14.61□□□□□ -0.07
USP3-205ENST00000557884 FBRSQ9HAH7 460 aa14.61□□□□□ -0.07
USP3-205ENST00000557884 IPO11Q9UI26 975 aaKnown RBP14.61□□□□□ -0.07
USP3-205ENST00000557884 AMFRQ9UKV5 643 aa14.61□□□□□ -0.07
USP3-205ENST00000557884 PACSIN2Q9UNF0 486 aaPredicted RBP14.61□□□□□ -0.07
USP3-205ENST00000557884 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.61□□□□□ -0.07
USP3-205ENST00000557884 MID1O15344 667 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 ZRANB2O95218 330 aaKnown RBP eCLIP14.6□□□□□ -0.07
USP3-205ENST00000557884 IL1BP01584 269 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 KRT10P13645 584 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 CTNNA1P35221 906 aaKnown RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 P2RY2P41231 377 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 NBL1P41271 181 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 CDKN2BP42772 138 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 RECQLP46063 649 aaPredicted RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 ELAVL3Q14576 367 aaKnown RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 PAFAH1B3Q15102 231 aaKnown RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 CST6Q15828 149 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 ATXN7L2Q5T6C5 722 aaPredicted RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 KAZNQ674X7 775 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 SPOCD1Q6ZMY3 1216 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 DPY19L3Q6ZPD9 716 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 NT5DC3Q86UY8 548 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 FAM124AQ86V42 546 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 KBTBD6Q86V97 674 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 CCDC50Q8IVM0 306 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 SYCE1Q8N0S2 351 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 RYBPQ8N488 228 aaPredicted RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 RNF10Q8N5U6 811 aaKnown RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 PCDH20Q8N6Y1 951 aaKnown RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 OR6K2Q8NGY2 324 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 GRIN3AQ8TCU5 1115 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 GANCQ8TET4 914 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 LRRN4Q8WUT4 740 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 SPACA7Q96KW9 195 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 CCDC114Q96M63 670 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 CEP44Q9C0F1 390 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 PDFQ9HBH1 243 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 MBD1Q9UIS9 605 aaPredicted RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 SARDHQ9UL12 918 aa14.6□□□□□ -0.07
USP3-205ENST00000557884 MYO18AQ92614 2054 aaKnown RBP14.6□□□□□ -0.07
USP3-205ENST00000557884 USP34Q70CQ2 3546 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 ZNF487B1APH4 448 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 APOL1O14791 398 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 DNTTP04053 509 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 CTNNA2P26232 953 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 GKP32189 559 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 CNR2P34972 360 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 TPMTP51580 245 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 METAP1P53582 386 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 CYTH1Q15438 398 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 CARD16Q5EG05 197 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 NPNTQ6UXI9 565 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 RCOR2Q8IZ40 523 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 PLD5Q8N7P1 536 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 EXD1Q8NHP7 514 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 EXOC2Q96KP1 924 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 PABPC3Q9H361 631 aaKnown RBP14.59□□□□□ -0.07
USP3-205ENST00000557884 USP36Q9P275 1121 aaKnown RBP14.59□□□□□ -0.07
USP3-205ENST00000557884 HECAQ9UBI9 543 aaPredicted RBP14.59□□□□□ -0.07
USP3-205ENST00000557884 FARP1Q9Y4F1 1045 aaPredicted RBP14.59□□□□□ -0.07
USP3-205ENST00000557884 PCDHA3Q9Y5H8 950 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 HEY1Q9Y5J3 304 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 DOCK4Q8N1I0 1966 aa14.59□□□□□ -0.07
USP3-205ENST00000557884 IGHV1OR15-9A0A0B4J2B8 117 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 A0A1W2PP55 124 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 CCDC66A2RUB6 948 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 PLK4O00444 970 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 MCF2LO15068 1137 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 MAP3K13O43283 966 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 ZNF217O75362 1048 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 CTSLP07711 333 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 CHRNA3P32297 505 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 SLC8A1P32418 973 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 CCNHP51946 323 aaPredicted RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 RHOAP61586 193 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 IL10RBQ08334 325 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 CCDC173Q0VFZ6 552 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 GALNT2Q10471 571 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 SLC10A2Q12908 348 aaPredicted RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 BYSLQ13895 437 aaKnown RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 TAZQ16635 292 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 TTC31Q49AM3 519 aaPredicted RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 INO80DQ53TQ3 878 aaPredicted RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 ARSIQ5FYB1 569 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 SLC9A4Q6AI14 798 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 DSG4Q86SJ6 1040 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 VSIG1Q86XK7 387 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 DEFB119Q8N690 84 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 PIP4K2CQ8TBX8 421 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 CASKIN2Q8WXE0 1202 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 ALG3Q92685 438 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 ISG20Q96AZ6 181 aaKnown RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 TOE1Q96GM8 510 aaKnown RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 RBM41Q96IZ5 413 aaKnown RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 HEMGNQ9BXL5 484 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 EPC1Q9H2F5 836 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 ZDHHC6Q9H6R6 413 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 ITM2CQ9NQX7 267 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 DTLQ9NZJ0 730 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms