RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SUCOQ9UBS9 1254 aaKnown RBP12□□□□□ -0.49
VIPAS39-211ENST00000557658 DERAQ9Y315 318 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 TRPC5OSA6NMA1 111 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 DAB1O75553 588 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 VTNP04004 478 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 PDGFRBP09619 1106 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 CYP2B6P20813 491 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 GLRBP48167 497 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 COG7P83436 770 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 PPIDQ08752 370 aaKnown RBP12□□□□□ -0.49
VIPAS39-211ENST00000557658 SLC12A1Q13621 1099 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 TRIM25Q14258 630 aaKnown RBP12□□□□□ -0.49
VIPAS39-211ENST00000557658 NRF1Q16656 503 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 DCAF6Q58WW2 860 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 ERI1Q8IV48 349 aaKnown RBP12□□□□□ -0.49
VIPAS39-211ENST00000557658 TP53INP2Q8IXH6 220 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 LSMEM2Q8N112 164 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 LRRC52Q8N7C0 313 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 TOP1MTQ969P6 601 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 ATP6V1E2Q96A05 226 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 DNAI2Q9GZS0 605 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 RHOJQ9H4E5 214 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 CHRAC1Q9NRG0 131 aa12□□□□□ -0.49
VIPAS39-211ENST00000557658 MAGED2Q9UNF1 606 aaPredicted RBP12□□□□□ -0.49
VIPAS39-211ENST00000557658 DCLK1O15075 740 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 PHGDHO43175 533 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 HCRTO43612 131 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 H6PDO95479 791 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 JUNP05412 331 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 C8BP07358 591 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 HSPA1AP0DMV8 641 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 HSPA1BP0DMV9 641 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 COL6A2P12110 1019 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 DNAJB1P25685 340 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 CSRP3P50461 194 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 GLRA4Q5JXX5 417 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 NOL9Q5SY16 702 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 KCTD11Q693B1 232 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 ZC3HC1Q86WB0 502 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 FBXO16Q8IX29 292 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 NUP93Q8N1F7 819 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 FSTL5Q8N475 847 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 FAM156AQ8NDB6 213 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 BEST2Q8NFU1 509 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 ZSCAN18Q8TBC5 510 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 DIS3LQ8TF46 1054 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 KCTD4Q8WVF5 259 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 COQ10BQ9H8M1 238 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 MRGBPQ9NV56 204 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 RHBDL2Q9NX52 303 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 RNF11Q9Y3C5 154 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 RAD54BQ9Y620 910 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 SQORQ9Y6N5 450 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 C7orf72A4D263 438 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 ZBTB24O43167 697 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 PGK2P07205 417 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 TXNP10599 105 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 PTPN1P18031 435 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 NOS2P35228 1153 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 PSMD8P48556 350 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 CDK9P50750 372 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 STX5Q13190 355 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 IKBKEQ14164 716 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 MAPRE2Q15555 327 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 ITPRIPL1Q6GPH6 555 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 KRT80Q6KB66 452 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 LRRC8EQ6NSJ5 796 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 APOBEC3FQ8IUX4 373 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 CRYBG2Q8N1P7 616 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 LINC01465Q8N7H1 131 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 CCNYL1Q8N7R7 359 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 KDM1BQ8NB78 822 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 UNC93B1Q9H1C4 597 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 TRPV6Q9H1D0 765 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 GBA3Q9H227 469 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 SEMA6AQ9H2E6 1030 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 PLEKHA5Q9HAU0 1116 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 STAP1Q9ULZ2 295 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 MYRFQ9Y2G1 1151 aa11.99□□□□□ -0.49
VIPAS39-211ENST00000557658 MCM3APO60318 1980 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 C9IYK1 514 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 GOLGA8TH3BQL2 631 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 M0QYT0 321 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 NCAM2O15394 837 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 MTSS1O43312 755 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 DLX3O60479 287 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 NPHS1O60500 1241 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 SLC35E2BP0CK96 405 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 GNL1P36915 607 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 ALDH3B2P48448 385 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 EMP3P54852 163 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 PITX1P78337 314 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 RHDQ02161 417 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 OTUD1Q5VV17 481 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 GK5Q6ZS86 529 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 CARM1Q86X55 608 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 PCDH20Q8N6Y1 951 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 SLC2A14Q8TDB8 520 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 TRPC4APQ8TEL6 797 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms