RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CLCN5P51795 746 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 EIF3EP60228 445 aaKnown RBP15.56■□□□□ 0.08
NEDD1-213ENST00000557644 SLC20A2Q08357 652 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 CYTH1Q15438 398 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 TMEM92Q6UXU6 159 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 BZW1Q7L1Q6 419 aaKnown RBP15.56■□□□□ 0.08
NEDD1-213ENST00000557644 TSEN2Q8NCE0 465 aaKnown RBP15.56■□□□□ 0.08
NEDD1-213ENST00000557644 CCDC26Q8TAB7 109 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 TFB1MQ8WVM0 346 aaKnown RBP15.56■□□□□ 0.08
NEDD1-213ENST00000557644 PTPRN2Q92932 1015 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 GABRG3Q99928 467 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 CEP41Q9BYV8 373 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 TM6SF2Q9BZW4 377 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 A0A1W2PQF6 199 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 H7C0C1 242 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 RBP3P10745 1247 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 HOXB2P14652 356 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 ATP5OP48047 213 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 NRLP54845 237 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 PRKD1Q15139 912 aaPredicted RBP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 HNRNPA1L2Q32P51 320 aaKnown RBP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 C22orf39Q6P5X5 142 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 TRMT11Q7Z4G4 463 aaKnown RBP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 CREG2Q8IUH2 290 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 CCDC13Q8IYE1 715 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 EXOC2Q96KP1 924 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 AP1M1Q9BXS5 423 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 DNPEPQ9ULA0 475 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 TTC7AQ9ULT0 858 aaPredicted RBP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 MMP17Q9ULZ9 603 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 SHROOM3Q8TF72 1996 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 CHURC1-FNTBB4DL54 471 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 PGRMC1O00264 195 aaKnown RBP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 CES2O00748 559 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 NPC1O15118 1278 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 MUSKO15146 869 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 MATN3O15232 486 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 VASPP50552 380 aaPredicted RBP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 CLCN6P51797 869 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 GEMIN4P57678 1058 aaKnown RBP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 LBRQ14739 615 aaKnown RBP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 INO80DQ53TQ3 878 aaPredicted RBP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 TMCO4Q5TGY1 634 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 SDE2Q6IQ49 451 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 BMP8AQ7Z5Y6 402 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 FBXL6Q8N531 539 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 KDM1BQ8NB78 822 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 TTC13Q8NBP0 860 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 ACTRT1Q8TDG2 376 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 QKIQ96PU8 341 aaKnown RBP eCLIP15.55■□□□□ 0.08
NEDD1-213ENST00000557644 SEPT10Q9P0V9 454 aa15.55■□□□□ 0.08
NEDD1-213ENST00000557644 MCF2LO15068 1137 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 SIN3BO75182 1162 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 GJB3O75712 270 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 CCNB1P14635 433 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 RBL1P28749 1068 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 ZBTB17Q13105 803 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 SNX1Q13596 522 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 CRY1Q16526 586 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 KCTD19Q17RG1 926 aaPredicted RBP15.54■□□□□ 0.08
NEDD1-213ENST00000557644 SLC45A4Q5BKX6 768 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 ATXN7L2Q5T6C5 722 aaPredicted RBP15.54■□□□□ 0.08
NEDD1-213ENST00000557644 C9orf64Q5T6V5 341 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 TIGD7Q6NT04 549 aaPredicted RBP15.54■□□□□ 0.08
NEDD1-213ENST00000557644 PGBD5Q8N414 524 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 OR6K2Q8NGY2 324 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 SLC35B2Q8TB61 432 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 CD248Q9HCU0 757 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 PRSS16Q9NQE7 514 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 CXorf51AA0A1B0GTR3 108 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 TTC24A2A3L6 582 aaPredicted RBP15.54■□□□□ 0.08
NEDD1-213ENST00000557644 JCHAINP01591 159 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 RGRP47804 291 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 XRCC4Q13426 336 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 HSF5Q4G112 596 aaPredicted RBP15.54■□□□□ 0.08
NEDD1-213ENST00000557644 EOGTQ5NDL2 527 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 MARC1Q5VT66 337 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 SYT13Q7L8C5 426 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 SPEM1Q8N4L4 309 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.54■□□□□ 0.08
NEDD1-213ENST00000557644 PRELID2Q8N945 189 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 MAML1Q92585 1016 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 ZNF599Q96NL3 588 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 LHX3Q9UBR4 397 aa15.54■□□□□ 0.08
NEDD1-213ENST00000557644 PDE2AO00408 941 aaPredicted RBP15.53■□□□□ 0.08
NEDD1-213ENST00000557644 LIASO43766 372 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 MAXP61244 160 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 RHOAP61586 193 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 SATB1Q01826 763 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 HNRNPDQ14103 355 aaKnown RBP15.53■□□□□ 0.08
NEDD1-213ENST00000557644 DARS2Q6PI48 645 aaKnown RBP15.53■□□□□ 0.08
NEDD1-213ENST00000557644 DPY19L3Q6ZPD9 716 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 CHST14Q8NCH0 376 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 OR2A12Q8NGT7 310 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 TMEM121Q9BTD3 319 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 CINPQ9BW66 212 aaPredicted RBP15.53■□□□□ 0.08
NEDD1-213ENST00000557644 CEP44Q9C0F1 390 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 BRD8Q9H0E9 1235 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 SLC6A17Q9H1V8 727 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 RBM22Q9NW64 420 aaKnown RBP eCLIP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms