RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 DQX1Q8TE96 717 aaKnown RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 RFFLQ8WZ73 363 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 CNDP2Q96KP4 475 aaKnown RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 BTN2A3PQ96KV6 586 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 PRICKLE1Q96MT3 831 aaPredicted RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 SLC6A18Q96N87 628 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 UBL7Q96S82 380 aaPredicted RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 GOLPH3LQ9H4A5 285 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 EBF2Q9HAK2 575 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 AASDHPPTQ9NRN7 309 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 DNAJB12Q9NXW2 375 aaKnown RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 STIM2Q9P246 746 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 SLC12A6Q9UHW9 1150 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 HOOK1Q9UJC3 728 aaKnown RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 CNTN6Q9UQ52 1028 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 DMTF1Q9Y222 760 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 ZDHHC9Q9Y397 364 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 PCDHB4Q9Y5E5 795 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 MGAQ8IWI9 3026 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 FAM47DPA6NHR8 397 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 TTC34A8MYJ7 566 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 ALOX15BO15296 676 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 RNGTTO60942 597 aaKnown RBP8.93□□□□□ -0.98
VRK1-206ENST00000557222 APOEP02649 317 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 WNT1P04628 370 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 SLC2A3P11169 496 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 EPHA8P29322 1005 aaPredicted RBP8.93□□□□□ -0.98
VRK1-206ENST00000557222 GPD2P43304 727 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 ACADVLP49748 655 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 RGS7P49802 495 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 ADPRHP54922 357 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 NXPH1P58417 271 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 EIF4EBP2Q13542 120 aaPredicted RBP8.93□□□□□ -0.98
VRK1-206ENST00000557222 STIM1Q13586 685 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 FSCBQ5H9T9 825 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 TMEM164Q5U3C3 297 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 SFMBT2Q5VUG0 894 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 FAM46CQ5VWP2 391 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 NAPEPLDQ6IQ20 393 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 FBXL19Q6PCT2 694 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 LAYNQ6UX15 382 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 DSG4Q86SJ6 1040 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 TMEM110Q86TL2 294 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 PRPF39Q86UA1 669 aaKnown RBP8.93□□□□□ -0.98
VRK1-206ENST00000557222 DHX40Q8IX18 779 aaKnown RBP8.93□□□□□ -0.98
VRK1-206ENST00000557222 FMR1NBQ8N0W7 255 aaPredicted RBP8.93□□□□□ -0.98
VRK1-206ENST00000557222 LMO3Q8TAP4 145 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 PTPRN2Q92932 1015 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 CCDC97Q96F63 343 aaPredicted RBP8.93□□□□□ -0.98
VRK1-206ENST00000557222 DHTKD1Q96HY7 919 aaPredicted RBP8.93□□□□□ -0.98
VRK1-206ENST00000557222 SERAC1Q96JX3 654 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 SPAG5Q96R06 1193 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 MED15Q96RN5 788 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 ZSWIM1Q9BR11 485 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.93□□□□□ -0.98
VRK1-206ENST00000557222 TJP2Q9UDY2 1190 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 SERGEFQ9UGK8 458 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 SLCO3A1Q9UIG8 710 aa8.93□□□□□ -0.98
VRK1-206ENST00000557222 ZNF462Q96JM2 2506 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 FAM149AA5PLN7 773 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 KCNU1A8MYU2 1149 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 PLK4O00444 970 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 CAPN9O14815 690 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 PSMA7O14818 248 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 RRP8O43159 456 aaKnown RBP8.92□□□□□ -0.98
VRK1-206ENST00000557222 MED7O43513 233 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 GNA14O95837 355 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 IGLV3-25P01717 112 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 GLI1P08151 1106 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 CKMT2P17540 419 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 BRD2P25440 801 aaKnown RBP8.92□□□□□ -0.98
VRK1-206ENST00000557222 MZF1P28698 734 aaPredicted RBP8.92□□□□□ -0.98
VRK1-206ENST00000557222 EIF2S3P41091 472 aaKnown RBP8.92□□□□□ -0.98
VRK1-206ENST00000557222 PMS1P54277 932 aaKnown RBP8.92□□□□□ -0.98
VRK1-206ENST00000557222 YWHAZP63104 245 aaKnown RBP8.92□□□□□ -0.98
VRK1-206ENST00000557222 NUCB2P80303 420 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 E2F1Q01094 437 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 IL9RQ01113 521 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 CCDC15Q0P6D6 951 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 LRMPQ12912 555 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 PNOCQ13519 176 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 RABGAP1LQ5R372 815 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 NEK5Q6P3R8 708 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 KANSL1Q7Z3B3 1105 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 TRIM69Q86WT6 500 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 GATAD2AQ86YP4 633 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 STK40Q8N2I9 435 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 PPM1KQ8N3J5 372 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 AADATQ8N5Z0 425 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 EID2Q8N6I1 236 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 ATP6V0D2Q8N8Y2 350 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 OR14C36Q8NHC7 312 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 CLEC4CQ8WTT0 213 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 ERCC4Q92889 916 aaPredicted RBP8.92□□□□□ -0.98
VRK1-206ENST00000557222 SMARCE1Q969G3 411 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 FAM149B1Q96BN6 582 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 FAM81BQ96LP2 452 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 TIGD1Q96MW7 591 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 BBC3Q96PG8 261 aaPredicted RBP8.92□□□□□ -0.98
VRK1-206ENST00000557222 MIS12Q9H081 205 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms